Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1778 ATGATGAGCCCACTTGTCCTGGACAACTCCAATAATCTCAATGTCCACAGCTTGATTCCTAATTTCTCTCAAGATCCTGATTTTCCAGGAACTTTCCCTGTTTTACCAGCAGAAAATGAAATCCAGGAAAGTCAAAAGAGGAAAGCCATGGATGTTATAGAGATTACTAGTTCTGTAATCCCAACTCCTGCAGTTTCTGAGAGTGGAAGCAAGAGTTCTGGAAGAGGTAAGAGAGCCAAGAGCAACGTAACAGAAGAAGGTAAACCGAAGGAAGTGGTTCATGTCAGAGCCAGAAGAGGTCAAGCTACAGACAGTCACAGTTTAGCAGAAAGGGTCAGAAGGGGGAAAATCAATGAAAAAATAAGACGCCTGCAGACCATTGTCCCAGGATGTTACAAGACCATGGGCATGGCAGTGATGTTGGACGAGATTATAAACTATGTTCAGTCCTTGCAGCATCAGGTGGAGTTTCTATCTATGAAGCTGACTGCAGCAAGTACCTTCTACGACTTCAATTCAGAGACAGATGCCATAGAAACAATTCAGAGAGCAAGGGCATTCAAGGCAAAAGAATTATCATCAAGAAATGGTAGTGAAAAAGGATATGGTGGTGAAGGGGTTTCTTGCTTTCATCAAACTTGGCCTCTCTAA 651 0.4286 MMSPLVLDNSNNLNVHSLIPNFSQDPDFPGTFPVLPAENEIQESQKRKAMDVIEITSSVIPTPAVSESGSKSSGRGKRAKSNVTEEGKPKEVVHVRARRGQATDSHSLAERVRRGKINEKIRRLQTIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSMKLTAASTFYDFNSETDAIETIQRARAFKAKELSSRNGSEKGYGGEGVSCFHQTWPL 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1778 216 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 99 169 IPR036638 GO:0046983
Lele05g1778 216 Gene3D - 98 169 IPR036638 GO:0046983
Lele05g1778 216 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 101 151 IPR011598 GO:0046983
Lele05g1778 216 MobiDBLite consensus disorder prediction 63 90 - -
Lele05g1778 216 CDD bHLH_AtBPE_like 91 176 - -
Lele05g1778 216 SMART finulus 107 157 IPR011598 GO:0046983
Lele05g1778 216 Pfam Helix-loop-helix DNA-binding domain 105 152 IPR011598 GO:0046983
Lele05g1778 216 MobiDBLite consensus disorder prediction 63 77 - -
Lele05g1778 216 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 49 175 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1778 Lele-ChrLele05 11796329 11797435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1778 17 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 51.887 3.37e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele05g1778 HLH 3.1e-06 No_clan