Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1745 ATGCTCTTTCGGAGCAAATTTCTTAGCTTTGCTCCGCCAAAACCCTTGATTCGTCATCATTCGCTTCAGTTGGACAACCACATTCTGGTATCAGAGTATTTGGATTGCTATGGCACCCAAGAAAAGTTCCTTGCTAAAGTTTCCGGTCTTCAAAGCCTTTCTTCCAGCGTGCAAAGCACTCAAGAGAAAAATGGCCATTCAGATGATGCCTCAAGAAGTCCAGAATTCCTGCAGGAGTTCCTTAAATCTGGTCCAAAAAAGGAACTTCTACGGGCATTCTTTGATAAAGACAAAAAGAACACTTCGGCAAAAGGCAGGGTGACTGAAAATAAGTCAAGGATACTTGGACGTTGGAGAAAGCAGCTAAGTATAGCAAAAGATGCTCGGCGTGTAGATGTACTCTGTTATAGAATATATTTGAGCTACAGGCTTCTAGATGGGACTTCCAAGTTTAAAGAACTCCATGAGATTGTTCAAGAGGCGAAGGCTAAACTGGAAACAGAAGTTGGTCCAGTTAATGGTGTTTCTGCCAAGATGGCAAGGGGCATTGTCAGCAGACTCTCTATTGCCAGTGATGTGCAGAAACTGTGCTCCCTTGCTGTTGAGAAAGCTGATGAGTGGCTGGTCTCTGTTTCCAATGCAAATCCAGATTCCAGAGAGGGTTCACTCCCTGCTGCCTGCAAGTTTGTTTTTGAAGATGTCACAGCTTCCTCAGTCAAAATCATTTTGATCGAAATGTCTAATTCATCTTCTGAGGACATCAAAGGTTTCAAGCTCTGGTATTACAAGAGTGGGGAGGAATTGCGCACTAAAGATCCTGTTTGTGTTTTCACGAAATCCCAGAGGAGGATTCTGATATCAAACCTCCAACCTTGTACAGAATATACATTTCGGATTGTATCTTACACAGATACATGTGATCGGGGTCATTCTGAGGCCAAGTGTTTCACTAAGAGCATTGAAATAATTAGAAGAAATCCTTCTTCGTTAGCTGCTTTGAATCATAACAAAGAAAATCATAAAACGGGAGGGACTTCTTCTGATCCCAAAAGGGAGCCCAATCCCACAATGGCAGACTCTGGATTTAAGGTTCGAGACCTTGGAAAAGTTCTGCGCCTTGCTTGGGCTCAAGAACAAGGTTGCTTTGAGGGGTTTTGCTGTGCTGATGTGAAAAATTGCTGTGGAGGAAGTGAAATGGTCAGGCCTAAATATTCAGAAGAGACATTGCCTAAGGTTTCAAGAGGCCTTGATTTAAATGTTGTTTCAGTTCCTGATTTAAATGAAGAATTAACGCCACCCTTTGAGTATTCTAGGGATGAAGATAACGGTTGTACCTTGCAGCAGGCTATCGGGGCTGATGATGATGCTGCTTCTCATGATATTGAGAAGATTGGTTTAGCGAGATCCCATGGCAGTGGTGACTCCCAAACCTGGGCCCACAGGCCAACCGGAGAAGTGCCAGCTGTTGACTCACGCGTAGATGCCGCCACATGCAGGAAAAGGTTAGCAAGCACAAATGAAGAGACTCATGATTGTGACAGCACTTTGATAAATGGATCTCCTTTACGCATTTCCGATGGATCTTGTTCCCTGGATGAGAACTTTGAGTATTGCGTGAAAGTAATTCGATGGCTAGAATGTGAGGGTCACATTAAGCAGGAATTCCGGTTGAAATTGCTAACATGGTTTAGTTTGAGGTCAACGGAGCAAGAGCGTAGGGTGGTCAACACCTATATTCAAACTCTGATTGATGACCCAGGTAGTTTGGCTGGACAACTTGTTGACTCTTTTTCTGATATTATATCTAACAAGAGGCCAAGAAATGGATTCTGTGATGAGGTTCGCAAACTGTCGTTCATCTCTGGTTCCCTTCTCATCTTTCTCCTTTCTCTCACGATAATGCAACTTCTACATGCTCCATCCTCACCGCACCTTTCCTTGCAAAGCTCAAACGCACATCTAAGGGGATTGCTTACGGTGAAGTCTTCTTCTTTATTTGCTATCAATTTTTCCTTTCAGCCCAGAAGGAGCCACAATTTAACATGGACGTCTTATAAAAGGGCCATTTTGAGCTCTAGTGATGCAAGAGCTGCTTATGTTGAAGCTGGAACTTCTGCAGCATCAACTGGAACAGCTGAGGATGATGTGTTGAAAGCCCTATCTCAGATCATTGATCCTGACTTTGGAACAGATATCGTTACATGTGGATTTGTGAAAGATCTCCAGATTGATGAAACTCTAGGAGAGGTGTCATTTCGGCTAGAGCTCACTACACCAGCATGTCCAATCAAGGACGTGTTTGAGCAGAAGGCAAATGAGGTGGTGGCAGTGCTTCCCTGGGTCAAAAATGTTAAAGTCACAATGTCAGCACAACCGGCCAAACCTATATTTGCAGGGCAGCTTCCAGCAGGTCTACAGACAATTTCAAATATCTTGGCTGTCTCAAGTTGCAAGGGGGGTGTCGGAAAATCAACTGTTGCTGTAAACCTAGCATACACTCTGGCTGGTATGGGAGCTAGAGTTGGTATATTTGATGCTGATGTTTATGGTCCAAGTTTACCAACAATGGTCTCTCCTGAAAGTCGACTGTTAGAAATGAACCAAGAGAAGAGGACCATAATTCCAACTGAATACTTGGGAGTCAAGTTGGTCTCTTTTGGCTTTGCCGGACAAGGACGTGCAATAATGCGTGGTCCAATGGTTTCTGGAGTTATTGACCAACTTTTGACTACTACTGAGTGGGGCGAGCTGGATTACCTTGTTATTGACATGCCCCCTGGAACTGGAGATATTCAACTGACTTTATGCCAGGTAGTTCCATTAACTGCTGCTGTAATTGTCACTACTCCTCAAAAGCTAGCATTCATTGATGTTGCAAAAGGAGTCCGCATGTTTTCAAAACTTAAGGTGCCATGCGTTGCTGTTGTTGAGAACATGTGTCATTTTGATGCTGATGGAAAGCGATATTACCCATTTGGTAGAGGTTCAGGTTCTCAGGTCGTCCAGCAGTTTGGAATACCTCATCTATTTGACCTTCCCATTAGGCCAACTCTATCTGCTTCTGGAGATAGTGGGATGCCTGAAGTGGTTGCTGATCCTCTTGGTGAAGTTGCTAAAACTTTCCAGAATCTAGGAGTATGTGTTGTGCAACAGTGTGCGAAGATTAGACAACAAGTTTCAACTGCGGTCACCTATGATAAATCAATGAAGGCAATTAGAGTGAAGGTACCAGATTCAGATGAAGAATTTTTTTTACATCCAGCAACGGTCAGACGGAATGATCGCTCTGCTCAGAGTGTGGATGAATGGACAGGGGAGCAGAAATTGGAGTATGGTGATGTTCCTGAAGATATTGAACCAGAAGAAATCCGGCCTATGGGAAATTATGCCGTTTCAATAACTTGGCCTGATGGATTTAGCCAGATTGCTCCGTATGATCAATTGCAGACAATAGAACGGCTAGTTGATGTTCCTCAGCTGACGGGTCAGTTGTGA 3495 0.4372 MLFRSKFLSFAPPKPLIRHHSLQLDNHILVSEYLDCYGTQEKFLAKVSGLQSLSSSVQSTQEKNGHSDDASRSPEFLQEFLKSGPKKELLRAFFDKDKKNTSAKGRVTENKSRILGRWRKQLSIAKDARRVDVLCYRIYLSYRLLDGTSKFKELHEIVQEAKAKLETEVGPVNGVSAKMARGIVSRLSIASDVQKLCSLAVEKADEWLVSVSNANPDSREGSLPAACKFVFEDVTASSVKIILIEMSNSSSEDIKGFKLWYYKSGEELRTKDPVCVFTKSQRRILISNLQPCTEYTFRIVSYTDTCDRGHSEAKCFTKSIEIIRRNPSSLAALNHNKENHKTGGTSSDPKREPNPTMADSGFKVRDLGKVLRLAWAQEQGCFEGFCCADVKNCCGGSEMVRPKYSEETLPKVSRGLDLNVVSVPDLNEELTPPFEYSRDEDNGCTLQQAIGADDDAASHDIEKIGLARSHGSGDSQTWAHRPTGEVPAVDSRVDAATCRKRLASTNEETHDCDSTLINGSPLRISDGSCSLDENFEYCVKVIRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVNTYIQTLIDDPGSLAGQLVDSFSDIISNKRPRNGFCDEVRKLSFISGSLLIFLLSLTIMQLLHAPSSPHLSLQSSNAHLRGLLTVKSSSLFAINFSFQPRRSHNLTWTSYKRAILSSSDARAAYVEAGTSAASTGTAEDDVLKALSQIIDPDFGTDIVTCGFVKDLQIDETLGEVSFRLELTTPACPIKDVFEQKANEVVAVLPWVKNVKVTMSAQPAKPIFAGQLPAGLQTISNILAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPESRLLEMNQEKRTIIPTEYLGVKLVSFGFAGQGRAIMRGPMVSGVIDQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCVAVVENMCHFDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVVADPLGEVAKTFQNLGVCVVQQCAKIRQQVSTAVTYDKSMKAIRVKVPDSDEEFFLHPATVRRNDRSAQSVDEWTGEQKLEYGDVPEDIEPEEIRPMGNYAVSITWPDGFSQIAPYDQLQTIERLVDVPQLTGQL 1164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1745 1164 FunFam fe-S cluster assembly factor HCF101, chloroplastic 1062 1151 - -
Lele05g1745 1164 SUPERFAMILY Fibronectin type III 229 305 IPR036116 GO:0005515
Lele05g1745 1164 FunFam Fe-S cluster assembly factor HCF101, chloroplastic 708 800 - -
Lele05g1745 1164 CDD FN3 228 304 IPR003961 GO:0005515
Lele05g1745 1164 Gene3D - 1062 1151 IPR038492 -
Lele05g1745 1164 FunFam fe-S cluster assembly factor HCF101, chloroplastic 804 1061 - -
Lele05g1745 1164 CDD Mrp_NBP35 810 1020 - -
Lele05g1745 1164 Gene3D - 707 796 IPR034904 -
Lele05g1745 1164 Gene3D - 804 1061 IPR027417 -
Lele05g1745 1164 Pfam NUBPL iron-transfer P-loop NTPase 808 1044 IPR033756 -
Lele05g1745 1164 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 712 793 IPR034904 -
Lele05g1745 1164 ProSitePatterns Mrp family signature. 914 930 IPR000808 GO:0005524
Lele05g1745 1164 Gene3D Immunoglobulins 209 314 IPR013783 -
Lele05g1745 1164 PANTHER IRON-SULFUR PROTEIN NUBPL 707 1089 IPR044304 GO:0005524|GO:0016226|GO:0051536
Lele05g1745 1164 MobiDBLite consensus disorder prediction 331 359 - -
Lele05g1745 1164 ProSiteProfiles Fibronectin type-III domain profile. 223 322 IPR003961 GO:0005515
Lele05g1745 1164 Hamap Iron-sulfur cluster carrier protein. 803 1060 IPR019591 GO:0005524|GO:0016226|GO:0051536|GO:0140663
Lele05g1745 1164 Pfam Iron-sulfur cluster assembly protein 713 787 IPR002744 -
Lele05g1745 1164 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 810 1056 IPR027417 -
Lele05g1745 1164 Pfam Gamma-butyrobetaine hydroxylase-like, N-terminal 1073 1141 IPR010376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1745 Lele-ChrLele05 11471155 11485120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1745 112 609 PHD Gene Family AT3G24440 46.680 1.02e-123 392