Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1741 ATGGACACTGCAAGCTTTCTGCCCGATCATTCCACTTGGGAATCTTCTCTGAGCTTGGTGGGATCTCTTAATCATCACCTTCTGCTTAGGAAAAAGCTGCAGAAGTTGAACTATTTCCTCATCTGTAGTAAAATTCAGTTCCTTCGATTGGTATGTATTGTGGTGGAGATGGCAAACCGACTAAAGGAAGATGAGAAGAACGAACGAATAATTCGGGGCCTTCTGAAACTTCAGGAGAATCGCAGATGTATTAATTGCGGCAGCCTGGGACCGCAATATGCTTGCACAAATTTTTGGACATTTGTTTGCACAAACTGCAGTGGAATACACCGAGAATTCACACATCGAGTTAAATCAATTTCGATGGCTAAATTTACTTCACAAGAAGTTAGTGCACTTCAGGAAGGAGGAAATCAGCGTGCGAAGGAAATTTATTTTAAAGAATGGGATCCACAACGTCATTCTCTTCCTGACAGCGGTAATATTGACCGGCTCCGGGACTTTATCAAGCATGTTTATGTGGATAGACGATATAGTGGTGAGAGGACCTATGACAAACCACCAAGAGTTGAGGCATATCAGGGAGGATCTAAAAGCCCACCGTATGAGGATGCATATGAACATCGTTACAGTGACAGGTCTAGTCCTGGTGGAAGAAGTCCTGGATATGATCAAGAAAGTAGACAATATGGTGATTACAGGAAAAGCCCAGGTCGTCCACCGATAATCAATGATTGGCGTCGTGAAGATAGATTTGGAGATGGAAGAAGATTTGAAGATCGTAGAACATCTGATGGAGATTATAAGCTGGAAGGCCAATCGCCCGAGCAAGCAAAAGATCGTGATTCTTCAAGTTCACCTGTTGTACGGCCTGTTAGAGATATTTTGGGTGAAAATGTAGTGCCTCTACGAATAAGTGAACCCCCCAAAACAAACAGTGGAAAGGCTGCTGGTGGCTCTACACTTACACTCACACAGAGAACTGCATCTTCCAGTAGCCTAGCATCTAGTAATGGAAACGCAGCAGAAGTTAAGCTTGAGACGACTAAGAGTCTTATTGATTTTGATGCTGAGCCCGAACCTCCTGTTGCTCCAGCAATTCCTCAAGCTCAACCAACTACTGCTGTACAGTCTGCTGTGCAACCAGCAAATTCTAGTGATGCCAACTGGGCATCTTTTGATGTTGCCCCTGCAGCAAAAGCTACCCAAGGTCCATCAAATCTAAGTCCACTTGACTCTGTTCTCTCACAACTATCAATGCCCTCCCCTTCCCCTTCCCCTGCCCCTGCCCCTGCCCCTGCCCCTGGTCTGGCGCCTGCTCAGGTTTCTGGAGTTCAAGGGCCTCTGCCAGCATCAGCTGCCACTGCTGCTGGAGCTGGATCTGGATCTGGAACTCTGGGCAACTTCTCACCAGTACCATCAAGTGGTACTTCTGTAACAGCCCCTGGATTGACAACAGCGCTGCCAATCAACAATGCAGGCCAGTGGGCCAGCGTGCAACACAACCCACCTGTGTTCCCTACCACTGGTAGTCATCCTGCTACTCAACAATTCATTCCGTCAGGAGGCGGATCTTTGAATAGTCAGCAGTGGAGTGTATCACCAGTGCCCACAATGCAAGGGCACCCTAGCATACAAATGCCACATGCATTCCCTGTTGCCTCAAAACCTACCAATGAGGTTAGCTCTAGCGCTGCTTCACAGCCTTCAAAAGAAGTGCAACCAAGTGGAAGAAAAGAACTCCCTGAGGATCTCTTCACTGTAAAGTATTCATCCTTCACTTCTCTGGCTCCAGGGTGGCAAATGGGTCCTCCCCATGGCATGGGTATCTATATGCAATATAATACTGCAGCGCCCATGCCAAGTTTTACACATCCATCAAAATCGACAAATCCATTTGATGTCAGCATCGAAGCACCTCCAGTTCAAGCCCCAACATTTCCTTTCATGTCATCCTTGCAAGGTGCTCTGCCTAGTATACCGCCTTCTTCAGGGGTAATACACCCCCAAAGCCTGGGTAATCCATCCCTTTCCTGGAGCTCACCCCAGTCATCATATGGTTCAGTACTTCCTCCACAAGCTCAAGTTCATGCACCTGCAATGGCACCAAGGCCATACATGGGGCAACAAGTGCCAACTAACATGCCAATGCCTAGGCATCAGGGGGCTGCTGTTGGCTTCTCTAATCCAGATCAGCAGATAACTGGTATGTTCTCAACCCCTTCTGCGGCAAATTCCTTCTCTGCTGGAGGCAACCCCTTTGGATGA 2268 0.4753 MDTASFLPDHSTWESSLSLVGSLNHHLLLRKKLQKLNYFLICSKIQFLRLVCIVVEMANRLKEDEKNERIIRGLLKLQENRRCINCGSLGPQYACTNFWTFVCTNCSGIHREFTHRVKSISMAKFTSQEVSALQEGGNQRAKEIYFKEWDPQRHSLPDSGNIDRLRDFIKHVYVDRRYSGERTYDKPPRVEAYQGGSKSPPYEDAYEHRYSDRSSPGGRSPGYDQESRQYGDYRKSPGRPPIINDWRREDRFGDGRRFEDRRTSDGDYKLEGQSPEQAKDRDSSSSPVVRPVRDILGENVVPLRISEPPKTNSGKAAGGSTLTLTQRTASSSSLASSNGNAAEVKLETTKSLIDFDAEPEPPVAPAIPQAQPTTAVQSAVQPANSSDANWASFDVAPAAKATQGPSNLSPLDSVLSQLSMPSPSPSPAPAPAPAPGLAPAQVSGVQGPLPASAATAAGAGSGSGTLGNFSPVPSSGTSVTAPGLTTALPINNAGQWASVQHNPPVFPTTGSHPATQQFIPSGGGSLNSQQWSVSPVPTMQGHPSIQMPHAFPVASKPTNEVSSSAASQPSKEVQPSGRKELPEDLFTVKYSSFTSLAPGWQMGPPHGMGIYMQYNTAAPMPSFTHPSKSTNPFDVSIEAPPVQAPTFPFMSSLQGALPSIPPSSGVIHPQSLGNPSLSWSSPQSSYGSVLPPQAQVHAPAMAPRPYMGQQVPTNMPMPRHQGAAVGFSNPDQQITGMFSTPSAANSFSAGGNPFG 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1741 755 MobiDBLite consensus disorder prediction 402 421 - -
Lele05g1741 755 MobiDBLite consensus disorder prediction 422 436 - -
Lele05g1741 755 CDD ArfGap_AGFG 68 178 - -
Lele05g1741 755 FunFam Arf-GAP domain and FG repeat-containing protein 1 57 191 - -
Lele05g1741 755 Pfam Putative GTPase activating protein for Arf 69 179 IPR001164 GO:0005096
Lele05g1741 755 Gene3D Arf GTPase activating protein 57 187 IPR038508 -
Lele05g1741 755 MobiDBLite consensus disorder prediction 356 383 - -
Lele05g1741 755 MobiDBLite consensus disorder prediction 499 580 - -
Lele05g1741 755 MobiDBLite consensus disorder prediction 400 461 - -
Lele05g1741 755 ProSiteProfiles ARF GTPase-activating proteins domain profile. 68 186 IPR001164 GO:0005096
Lele05g1741 755 SMART arf_gap_3 68 186 IPR001164 GO:0005096
Lele05g1741 755 SUPERFAMILY ArfGap/RecO-like zinc finger 67 179 IPR037278 -
Lele05g1741 755 MobiDBLite consensus disorder prediction 241 278 - -
Lele05g1741 755 MobiDBLite consensus disorder prediction 183 342 - -
Lele05g1741 755 MobiDBLite consensus disorder prediction 556 574 - -
Lele05g1741 755 MobiDBLite consensus disorder prediction 313 342 - -
Lele05g1741 755 MobiDBLite consensus disorder prediction 499 541 - -
Lele05g1741 755 PANTHER ARFGAP/RECO-RELATED 57 755 IPR044820 GO:0005096
Lele05g1741 755 PRINTS HIV Rev interacting protein signature 80 99 IPR001164 GO:0005096
Lele05g1741 755 PRINTS HIV Rev interacting protein signature 117 138 IPR001164 GO:0005096
Lele05g1741 755 PRINTS HIV Rev interacting protein signature 99 116 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1741 Lele-ChrLele05 11435376 11441323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1741 68 201 C2H2 Transcription Factor Family AT4G21160 29.286 6.39e-13 68.9