Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1719 ATGCAAAAGCCCCCGCCGCCGCCACCAGGTGCATCACGACCATCCCAATCACCAGCTTATGCCCCTAAACCTCCTTCACCACCACTATTCCTGAGCAGCAGCGGTGGCTCAGGTTCCAACTATACAGGTGGCGAAAATCCACTTCCACCCCCTTCTCCTAGTATTGCATTGAGTTTCTCAAAGAGCACATTTACATATGAAGAGTTGGTACGGGCAACAGATGGGTTCTCCGATGCCAACCTTCTTGGACAAGGTGGATTTGGTTATGTTCACAAAGGAATCCTGCCGAATGGGAAGGAGGTGGCAATCAAGCAGCTAAAGGCAGGAAGTGGGCAGGGAGAACGAGAATTTCAAGCAGAAGTTGAGATCATTAGCCGGGTTCATCACAGACACCTTGTTTCTCTGGTTGGATACTGCATCACTGGACACCAGAGATTGCTTATGTTTGGGATTGGTTGCAAGAATCTGATAGATATATCTGCTGTAGGAAAAGGGCGACCTACTATGGATTGGCCCACAAGACTGAAAATTGCATTAGGATCAGCAAAAGGACTGGCGTATCTCCATGAGGATTGTCATCCTAAGATCATCCATCGTGATATCAAAGCTGCTAATATACTTCTGGATTTCAAGTTTGAAGCAAAGGTTGCTGATTTTGGACTAGCGAGGTTTTCTTCTGATGTCAATACTCATGTTTCCACTCGAGTGATGGGGACTTTTGGGTATCTGGCTCCAGAATATGCTTCCAGTGGGAAACTCACCGACAAATCAGATGTTTTCTCCTTTGGAGTCATGCTCCTGGAGCTAATTACTGGACGTCGACCGGTTGACACAACTCATGCTTTCATGGAGGATAGTCTGGTAGACTGGGCAAGGCCTTTGCTTATCCGTGCTTTGGAAGAGCATGATTTTGATTCTGTGGTTGATCCAAGGCTCAAAGATGAATATGACCTCAATGAAATGACTCGCATAGTTGCATGTGCTGCAGCCTGCACCCGTCATTCAGCACGTCATAGACCAAAAGTGAGCCAGGTTGTTCGTGCTCTGGAAGGAGATATGTCTCTATCAGATCTGAACGAAGGAATTAAACCTGGACACAGCTCTGCCTACAGTTTCCGAGGAAGCTCTGATTATGACACTGCACAATACAAGGAAGACATGAAAAAATTCAGGAAAATGGCTTTGGGAACCCAGGAGCTAGGCGTTAGCAATGAATACAGTGGACGTACAAGTGACAACAGCTTATACCCATCTGGCTCAAGCAGCGAAGGCCAGAGCCGCCGGACCACCCAGGAAATGGAAATGAGAAAGATGAATAACCACCAAGGTTACAGTGGAAGCTCTTGA 1347 0.4699 MQKPPPPPPGASRPSQSPAYAPKPPSPPLFLSSSGGSGSNYTGGENPLPPPSPSIALSFSKSTFTYEELVRATDGFSDANLLGQGGFGYVHKGILPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGHQRLLMFGIGCKNLIDISAVGKGRPTMDWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLARFSSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITGRRPVDTTHAFMEDSLVDWARPLLIRALEEHDFDSVVDPRLKDEYDLNEMTRIVACAAACTRHSARHRPKVSQVVRALEGDMSLSDLNEGIKPGHSSAYSFRGSSDYDTAQYKEDMKKFRKMALGTQELGVSNEYSGRTSDNSLYPSGSSSEGQSRRTTQEMEMRKMNNHQGYSGSS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1719 448 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 46 412 - -
Lele05g1719 448 FunFam proline-rich receptor-like protein kinase PERK1 54 151 - -
Lele05g1719 448 MobiDBLite consensus disorder prediction 403 448 - -
Lele05g1719 448 MobiDBLite consensus disorder prediction 403 428 - -
Lele05g1719 448 Pfam Protein tyrosine and serine/threonine kinase 81 349 IPR001245 GO:0004672|GO:0006468
Lele05g1719 448 MobiDBLite consensus disorder prediction 30 45 - -
Lele05g1719 448 MobiDBLite consensus disorder prediction 1 54 - -
Lele05g1719 448 SUPERFAMILY Protein kinase-like (PK-like) 49 349 IPR011009 -
Lele05g1719 448 MobiDBLite consensus disorder prediction 1 29 - -
Lele05g1719 448 SMART serkin_6 76 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1719 448 ProSiteProfiles Protein kinase domain profile. 76 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1719 448 FunFam Proline-rich receptor-like protein kinase PERK1 153 360 - -
Lele05g1719 448 ProSitePatterns Protein kinases ATP-binding region signature. 82 104 IPR017441 GO:0005524
Lele05g1719 448 Gene3D Transferase(Phosphotransferase) domain 1 155 361 - -
Lele05g1719 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Lele05g1719 448 Gene3D Phosphorylase Kinase; domain 1 52 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1719 Lele-ChrLele05 11254561 11257073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1719 32 423 Trihelix Transcription Factor Family AT1G70460 58.586 2.40e-149 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele05g1719 PK_Tyr_Ser-Thr 5.3e-40 CL0016