LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele05g1718	ATGACTGAACTCTCAACTCTAATGAACTCTGGACTCAATTCACCGATAAAATGGATTATTGTTTTGAAACTTTGTTTAGAAAACGAACATCCCATTCTGAGCTTTGAAGTTTTAAAGCTATCAGTCCTGTTCGCCATAGCCAAGCGAAGCACCATCACTCCCCGTCTTAGATGTGGGAACTCAGCTTTCCCGCCAAATCAACGAACTTCCGGTGCCTTCCCTGATACCGCCATGGGCACCCACCGGAGCTCCATCTTTTCTCCCTGGCTCCTAATCGTAATCATCGCCGTCTGTTTCTATCACTTCCACCCCTCTTCTGACTATGCTCGATCACAAAACCCAACCCTAACTCCCTCCAAACACATTTCAAATTCCACCGGAAATGTCAAGCCTCAGCCCCAAATCACTCGGCAAAACTACATCGTGCGGTTTCTGGAATACAAGACAGCCGAAGTGCACCGAACATATCTGCAATCGAGCATTCGATCCGAAGGGTGGGAATGGATCGAGCGGCGAAACCCAGCTGCGAAGTACCCCACTGATTTCGGATTGATTTCGATTGAGGATTCCGTTAAGGAAGGTTTGAAAGAGGAGATTCGGAAATTGGGTATGGTGAAGGATGTGAATGTAGATATGAGTTATAGGAGGGGTCTACTTAAGGACGACCGGGATAGAGTCGGTGCTTTTGTGGATGGAAAGAAGCGGCCCGGGAAGATATTCATGGCTATGTCTTTCAGTGAGGGACAGGGAGGTCACTCTTCCAAGATTAGCAACACTTCCGTTAATTGGGGGCGGCAACTCTTGATGCAGGGTATGCATTCTCTGAGACGAACCTCACTCTGGCAGAGATCTCAAGTTACTTCCATGTTCGGAGCCCAAGATCTTTGGACAAAAGGTTACACTGGTGCCAAAGTCAAAATGGCGATATTTGATACTGGCATTCGTGCTAATCATCCTCATTTTCGTAACATCAAGGAGCGTACAAATTGGACCAATGAAGATACACTAAACGACAATCTTGGGCATGGGACTTTTGTTGCTGGTGTGATTGCTGGAGTGGATGCAGAGTGTCTCGGTTTTGCACCAGATACAGAGATTTATGCATTTCGGGTGTTCACTGATGCACAGGTGCCTTATACATCATGGTTCCTTGATGCCTTCAACTATGCCATTGCTACTAATATGGATGTGCTAAATTTGAGTATAGGTGGACCTGATTATCTGGATCTCCCATTTGTTGAGAAGGTTTGGGAGATTACTGCAAATAATATTATGATGGTTTCTGCAATCGGAAATGATGGTCCGCTCTATGGAACTTTGAACAATCCAGCAGATCAAAGTGACGTGATTGGTGTTGGGGGAATTGACTATAGTGACCATATAGCCTCCTTTTCCTCACGTGGAATGAGTACCTGGGAGCTCCCACATGGTTATGGCCGTGTTAAGCCAGACATAGTTGCATATGGACGGGACATAATGGGATCCAAGATTAGCACAGGTTGCAAAAGTTTGTCAGGAACTAGTGTTGCTAGTCCTGTGGTTGCTGGTGTTCAAGCATTGGTTGAGGGTGCTGCAAAACTTGCTGGTCCAAATATGTATGAGCAGGGTGCTGGCAGAATCGATCTGTTAGAGTCGTATGAGATTCTTAAGAACTATCGACCCAGGGCAAGCATCTTCCCCAGTGTTCTTGACTATACCGATTGTCCATACTCATGGCCCTTTTGTCGTCAGCCCCTATATGCAGGTGCCATGCCTGTCATATTCAATGCCACTATTTTAAATGGAATGGGTGTTGTTGGTTATGTTGAAAGTCCACCAATATGGCATCCTTCTGATGAGGAAGGGAACCTTTTAAGCATTCATTTTACATATTCAGAGGTTATTTGGCCTTGGACTGGTTACTTGGCACTTCACATGCAAATCAAGGAAGAAGGTATACAGTTTTCTGGAGAGATTGAAGGTAATGTGACTCTTAGGGTTTCCAGTCCTCCAGCTCCTGGAGAAAAAACCTCTCGAATTAGCACATGTGTGCTTCAGTTGAAGTTAAAAGTCGTTCCAACACCACCACGGTCAAAACGAATTTTGTGGGATCAGTTTCACAGCATCAAATACCCTCCTGGTTATATTCCAAGAGATTCCCTGGATGTTCGTAATGATATTCTTGACTGGCATGGGGACCATCTTCATACAAATTTCCATATCATGTTCAACAATTTGAGAGATGCTGGATATTATGTTGAAACACTTGGTTCTCCTCTTACATGTTTTGATGCCCGCCACTATGGAACACTTTTGTTGGTAGATCTTGAAGATGAGTACTTTGCTGAGGAGATTGAGAAGCTGAGAGATGATGTCATATATACTGGATTAGGACTTGCGGTCTTTGCTGAATGGTATAATGTGGATACAATGGTAAAGATGAGATTCTTTGATGATAATACACGGAGCTGGTGGACCCCTGTAACTGGAGGAGCGAATATTCCTGCCCTTAATGATCTCTTGGTCCCATTTGGCATTGCTTTTGGAGATAAGATTCTAAATGGTGACTTTTCACTCTTGGGTGAGCAGAGTAGATATGCGTCTGGAACGGATATAGTCAGATTTCCAATGGGTGGTTATGTACATGGATTCCCCTTCTTGGATAGTTCAGAAAGTGGGGCCACTCAGAATATGTTGCTGACTTCTGGCATGAACAAGGCAGATTCTCCTATTCTTGGCTTGACAGTGATGGGTGAAGGTCGTATAGCTGTGTATGGGGATTCTAATTGCCTGGACAGCAGCCATATGGTTACTAATTGTTATTGGCTTCTCAGGAAAATACTAGATTTCACTAGTGGTGATATTAGGGATCCAGTGCTTTTCTCTGATTCAGTGAAACTAGACTCCGCACTGTATGAAGACGACAATCGATTGCCATCTCGCAGAACTGACGTGAATTTCTCTACATATTCTGCTGTTGTGGGAAAAGAATTGATCTGCAGAAATGACGCAAAGTTTGAAATATGGGGAACAAAAGGCTATAGTTTGCAGGTTAGAGGAAGAAACAGAAGATTGCCTGGATATCCTGTGATTGATTTGGGGAGAGGTTTCAATTCTTCGTTTGACGCCTCTAATATTCCTAGGCGTCTCAAGCTGACTCCAAGTAGTAGGAGTGACTCTCTAGGGAACAGGTACTTGGGCTTGGGCCTTTTATATGGGGATGAGCCTGATGCTCCTTTGTTGGCCCGTAGTTACTGGCTTGCTCCTGCAGCTGTTGCGGCTACTGGTCAGTAA	3273	0.4455	MTELSTLMNSGLNSPIKWIIVLKLCLENEHPILSFEVLKLSVLFAIAKRSTITPRLRCGNSAFPPNQRTSGAFPDTAMGTHRSSIFSPWLLIVIIAVCFYHFHPSSDYARSQNPTLTPSKHISNSTGNVKPQPQITRQNYIVRFLEYKTAEVHRTYLQSSIRSEGWEWIERRNPAAKYPTDFGLISIEDSVKEGLKEEIRKLGMVKDVNVDMSYRRGLLKDDRDRVGAFVDGKKRPGKIFMAMSFSEGQGGHSSKISNTSVNWGRQLLMQGMHSLRRTSLWQRSQVTSMFGAQDLWTKGYTGAKVKMAIFDTGIRANHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGVDAECLGFAPDTEIYAFRVFTDAQVPYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKVWEITANNIMMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDIVAYGRDIMGSKISTGCKSLSGTSVASPVVAGVQALVEGAAKLAGPNMYEQGAGRIDLLESYEILKNYRPRASIFPSVLDYTDCPYSWPFCRQPLYAGAMPVIFNATILNGMGVVGYVESPPIWHPSDEEGNLLSIHFTYSEVIWPWTGYLALHMQIKEEGIQFSGEIEGNVTLRVSSPPAPGEKTSRISTCVLQLKLKVVPTPPRSKRILWDQFHSIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNNLRDAGYYVETLGSPLTCFDARHYGTLLLVDLEDEYFAEEIEKLRDDVIYTGLGLAVFAEWYNVDTMVKMRFFDDNTRSWWTPVTGGANIPALNDLLVPFGIAFGDKILNGDFSLLGEQSRYASGTDIVRFPMGGYVHGFPFLDSSESGATQNMLLTSGMNKADSPILGLTVMGEGRIAVYGDSNCLDSSHMVTNCYWLLRKILDFTSGDIRDPVLFSDSVKLDSALYEDDNRLPSRRTDVNFSTYSAVVGKELICRNDAKFEIWGTKGYSLQVRGRNRRLPGYPVIDLGRGFNSSFDASNIPRRLKLTPSSRSDSLGNRYLGLGLLYGDEPDAPLLARSYWLAPAAVAATGQ	1090

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele05g1718	1090	PRINTS	Subtilisin serine protease family (S8) signature	302	321	IPR015500	-
	Lele05g1718	1090	PRINTS	Subtilisin serine protease family (S8) signature	505	521	IPR015500	-
	Lele05g1718	1090	PRINTS	Subtilisin serine protease family (S8) signature	338	351	IPR015500	-
	Lele05g1718	1090	Gene3D	Peptidase S8/S53 domain	274	544	IPR036852	GO:0004252\|GO:0006508
	Lele05g1718	1090	PANTHER	PEPTIDASE S8	129	521	-	-
	Lele05g1718	1090	SUPERFAMILY	Subtilisin-like	280	598	IPR036852	GO:0004252\|GO:0006508
	Lele05g1718	1090	ProSitePatterns	Serine proteases, subtilase family, histidine active site.	342	352	IPR022398	-
	Lele05g1718	1090	Pfam	Subtilase family	303	526	IPR000209	GO:0006508\|GO:0008236
	Lele05g1718	1090	ProSiteProfiles	Serine proteases, subtilase domain profile.	280	562	-	-
	Lele05g1718	1090	ProSitePatterns	Serine proteases, subtilase family, serine active site.	506	516	IPR023828	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele05g1718	Lele-ChrLele05	11242680	11253229	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele05g1718	376	1089	Subtilisin-like Serine Gene Family	AT5G19660	77.524	0.0	1183