Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1710 ATGGGAGAAGGAGACGGGGGTGATTTCCCTCCGACGAATGTGTTATTGGATTCTGCTGCCGCAGCGTTGCCGTTGGATGGTTCAGGGAAGAAGCTAGCGAGGCAGCTCGATTTTACGGGTTTTGGTGGGGTATCGGGTAGTGTGGCTTCAAGCGAACATCCGCAATTGCAACTGCAGCCTCAGTCACGTCCACAGTCACTGCCTCGGGGACTGACACAGCAAACCATGGTTGTGATGCCAGTGCCGCCGCAGATACCTCATTCTTCAGTGAGGGTTGGAAAACCAGAATCTCCAAAATCAAGATCAAGACCTAACTTTGAAATGAAAGACTCTACTCCAAAGAAGCAAAAACAGTGCAATTGCAAACACTCAAGATGCTTAAAGTTATATTGCGAATGTTTTGCATCAGGAATATATTGTGAGGGGTGCAACTGTGTAAATTGTTTTAACAATGTTGAGAATGATGTGGCGAGACGGGAGGCTGTTGAAGCTACATTAGAGCGCAATCCAAATGCATTTAGGCCAAAAATTGCAAGCAGTCCTCATGGAACACGTAATAGCAGGGAGGAGACTGGAGAAGTTTTACTATTGGGAAAGCACAACAAGGGCTGCCACTGTAAAAAATCAGGATGCCTCAAAAAGTACTGTGAATGCTTCCAAGCCAACATTCTTTGCTCTGAAAATTGCAAATGCTTGGACTGCAAAAATTTTGAGGGAAATGAAGAAAGACAAGCTTTATTCCATGGAGATCAAAATAACAATATAGCATTTATTCAGCAGGCAGCAAATGCTGCCATAACTGGAGCTATTGGATCCTCTGGTTATTCATCCCCTCCAGTATCCAAGAAAAGAAAAGGTCAGGAGCACTTTTTCGGGCCAACAGTCAAGGATCCATCTGTTGGCAGGCTTGGGCAGTTTCAACAGGCAAAAAATGTCGGAGTTCCTGCACCTTCCTCTTCCTTGTCATCTGTCCCTGGTGCTGGGGTTGGAAGTGCTGCAGTAGGTCCTTCAAAATTTGCATACAGGTCTCTTTTAGCAGACATCATACAACCACAGCACTTGAAGGAACTCTGCTCTGTTCTGGTGCTAGTATCAGGACAAGCCGCGAAGACACTCTCAGGACCAGATCAGAAAAATTTAGTGGACAAGCAGCGAATTGAGGATCAGACGGAGACTGCCCTTGCTTCATCAACTCTACAACAATTGCCTAGACAAATGGAGACTACTAACGTCAAGAAAACTGTGGATGATGATTGTTTGAGGGCAAACCAGACAGATAAAATCGGCCCAGATGATTCCAGTTCAGATGGTGCTGATGTCTCAAAGGGGAGGCCAATGTCTCCTGGAACTTTAGCCTTGATGTGCGATGAGCGAGATGCAATGTTCATGACAGCTCCCTCTCCTAGTGGTTTGATGGCCCATGTCGGCAACACATTTTCACAGTCTGCTTGTGGACAAGGCATGACAGAGGTGCATGCAGAACAAGAAAGGATTGTATTGACAAAGTTCAGAGATTTTCTAAATCGGGTGATCACTATGGGAGAAATAAATGAAACAAAGTGTTCTTCATTAGCTAGAAGTGTATTGGAAACTCAAACGGACAGGGTCAGCAATAATGTCGGAAATCCAAGTACTAAGATATCACATCAGCAGGTTGCCACTAGTAATGGTGTTGCCAAAGCTGCCGTCCCATCAATGGCCACAATTATGAACACAATAACTTCAACAGCTTTAATTCCTAATAACATCATTCCTGAAAATGGGGAAAGTAAGTCAAAGATCGAAAAGGAGACATGA 1797 0.4469 MGEGDGGDFPPTNVLLDSAAAALPLDGSGKKLARQLDFTGFGGVSGSVASSEHPQLQLQPQSRPQSLPRGLTQQTMVVMPVPPQIPHSSVRVGKPESPKSRSRPNFEMKDSTPKKQKQCNCKHSRCLKLYCECFASGIYCEGCNCVNCFNNVENDVARREAVEATLERNPNAFRPKIASSPHGTRNSREETGEVLLLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCLDCKNFEGNEERQALFHGDQNNNIAFIQQAANAAITGAIGSSGYSSPPVSKKRKGQEHFFGPTVKDPSVGRLGQFQQAKNVGVPAPSSSLSSVPGAGVGSAAVGPSKFAYRSLLADIIQPQHLKELCSVLVLVSGQAAKTLSGPDQKNLVDKQRIEDQTETALASSTLQQLPRQMETTNVKKTVDDDCLRANQTDKIGPDDSSSDGADVSKGRPMSPGTLALMCDERDAMFMTAPSPSGLMAHVGNTFSQSACGQGMTEVHAEQERIVLTKFRDFLNRVITMGEINETKCSSLARSVLETQTDRVSNNVGNPSTKISHQQVATSNGVAKAAVPSMATIMNTITSTALIPNNIIPENGESKSKIEKET 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1710 598 ProSiteProfiles CRC domain profile. 115 239 IPR005172 -
Lele05g1710 598 MobiDBLite consensus disorder prediction 82 113 - -
Lele05g1710 598 MobiDBLite consensus disorder prediction 422 447 - -
Lele05g1710 598 MobiDBLite consensus disorder prediction 44 68 - -
Lele05g1710 598 PANTHER TESMIN/TSO1-RELATED 50 516 IPR028307 -
Lele05g1710 598 MobiDBLite consensus disorder prediction 94 113 - -
Lele05g1710 598 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 116 151 IPR005172 -
Lele05g1710 598 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 202 236 IPR005172 -
Lele05g1710 598 MobiDBLite consensus disorder prediction 43 68 - -
Lele05g1710 598 MobiDBLite consensus disorder prediction 276 299 - -
Lele05g1710 598 SMART CXC_2 199 240 IPR033467 -
Lele05g1710 598 SMART CXC_2 114 154 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1710 Lele-ChrLele05 11191077 11196827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1710 1 560 CPP Transcription Factor Family AT4G29000 54.146 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lele05g1710 TCR 3.3e-12 No_clan