Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1708 ATGTCGGGCATGGACCCTCCTCCCAAGAGCTGGAGCATCTACACCCGAGCTGAGATTCTCGCCAATTACCAAGTCATGGAGCGGGTGGGCTCTGGAGCTTACTCCGATGTCTACAAAGGCCGTCGTCTCTCCGATGACCTCATCGTCGCCCTCAAAGAAGTTCATGATTACCAATCTGCTATCCGAGAAATCGAGGCCTTGCAGATCCTCCAGGGGTGCCCTAACGTCGTCGTCTTGCACGAGTACTTCTGGCGCGAGGACGAGGACGCCGTCCTCGTTCTCGAGTTTTTGAGAACTGACTTGTTGACGGTCATCAAAGAGGCCAAAAAGGAGGGTGCGGGTCTAAGCGTTGGGGAGATTAAGCAGTGGATGGTCCAGATTCTTTGCGGAGTCGATGCGTGCCACGCAAATATGATCGTGCATCGAGATTTGAAGCCCAGTAATTTGTTGATTTCGGAGGATGGTGTGCTGAAGTTGGCGGATTTTGGGCAGGCAAGGATACTTATGGAGCCTGGCTTTCATGCTATGGATGAAAACCCACCACCTTATGAAGACGATATTTCGAATAATGAGAGATCTCCTCAACATCCTGAAGTATTTCCTCAGACACACAACCAAAGCCAAGAAGGCTATGGAAATCAACAGGGAACTGTAACTCAAGATGAATATTATAGAGAATTGGAAGAGATAAAAGCTAAGCACTCGACAGATGACATGGATAAGGATACGAACTTCCAGGATGGGAATACATCTTGTCTTGCAACTTGCACAATAAGTGACATAGAAGATGATTTTATGAAGGGTTCGTTTACTTATGAAGCAGATGTCAGAGACAGTGAAGAAGATTGTCTCACAGCATGCGTTGGAACCCGATGGTACAGGGCTCCTGAACTGCTTTATGGATCAGGTGACTATGGGTTAGAGATTGATCTCTGGGCATTGGGCTGCATCTTCGCAGAACTCCTAACTCTGGAGCCCTTATTTCCTGGGGCAGGTGATATTGATCAGCTCAGTAGAATTATTGACGTTTTAGGCAACCTCAATGAGGAAGTTTGGTCTGGTTGTTCCAAGCTTCCTGATTATGAAAAAATCTCGTTCACTAAGGTGGAGAACCCTCCAGGTATCGAAGGCCGCCTGCCCAACCGATCCCAGGATGAAGTCTCTTTAGTGAAGAAACTGGTCTGTTATGATCCGGCTAGAAGAGCTACAGCAATGGAACTTCTCCAAGACAAGTTTTTGGGTGAAGAACCTTTTCCTGTACCTGTTTCTGAGCTGCGGGTTCCTTTGACAAAAACTTCACACGATGAAGACTCTGGCCATAATCTCAATGATGTGGATTTAGATTCTGATTTTGAGGACTTCAACTCTATGAAAGTCATCAGAACTGGTACTGGGTTTTCTATTCAATTTCCCTGA 1416 0.4668 MSGMDPPPKSWSIYTRAEILANYQVMERVGSGAYSDVYKGRRLSDDLIVALKEVHDYQSAIREIEALQILQGCPNVVVLHEYFWREDEDAVLVLEFLRTDLLTVIKEAKKEGAGLSVGEIKQWMVQILCGVDACHANMIVHRDLKPSNLLISEDGVLKLADFGQARILMEPGFHAMDENPPPYEDDISNNERSPQHPEVFPQTHNQSQEGYGNQQGTVTQDEYYRELEEIKAKHSTDDMDKDTNFQDGNTSCLATCTISDIEDDFMKGSFTYEADVRDSEEDCLTACVGTRWYRAPELLYGSGDYGLEIDLWALGCIFAELLTLEPLFPGAGDIDQLSRIIDVLGNLNEEVWSGCSKLPDYEKISFTKVENPPGIEGRLPNRSQDEVSLVKKLVCYDPARRATAMELLQDKFLGEEPFPVPVSELRVPLTKTSHDEDSGHNLNDVDLDSDFEDFNSMKVIRTGTGFSIQFP 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1708 471 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Lele05g1708 471 Gene3D Transferase(Phosphotransferase) domain 1 15 213 - -
Lele05g1708 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Lele05g1708 471 MobiDBLite consensus disorder prediction 187 214 - -
Lele05g1708 471 Pfam Protein kinase domain 23 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1708 471 Pfam Protein kinase domain 281 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1708 471 SMART serkin_6 23 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1708 471 FunFam Cyclin-dependent kinase F-1 14 108 - -
Lele05g1708 471 PANTHER CELL DIVISION PROTEIN KINASE 22 418 - -
Lele05g1708 471 MobiDBLite consensus disorder prediction 193 214 - -
Lele05g1708 471 SUPERFAMILY Protein kinase-like (PK-like) 7 432 IPR011009 -
Lele05g1708 471 ProSiteProfiles Protein kinase domain profile. 23 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1708 471 Gene3D Transferase(Phosphotransferase) domain 1 246 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1708 Lele-ChrLele05 11171657 11173597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1708 7 471 Core Cell Cycle Gene Families AT4G28980 62.395 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Lele05g1708 Pkinase 3.1e-33 CL0016