Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1698 ATGGAACGGATTGTAGGCGGCAAGTATAAGCTTGGCCGCAAGATCGGTAGCGGATCCTTCGGTGAAATTTATCTTGCTACGCATATTGATACTTTCGAGATCGTCGCCGTCAAGATCGAGAATACTAAAACAAAGCATCCGCAGTTGCTTTATGAGGCAAAACTGTACAATATTCTTCAAGGAGGAAGTGGCATTCCTAGCATAAAATGGTCTGGTGTCGATGGGGAGGAGAATGTGCTTGTTCTTGATTTGCTGGGACCGAGTCTTGAGGATCTGTTTGTTTATTGTGGAAGAAAGTTTTCGTTGAAGACTGTCTTAATGCTGGCTGATCAAATGATTACTAGAATAGAATATGTGCACTCCAAGGGATTTTTGCATAGGGATATAAAACCTGATAACTTTCTCATGGGACTTGGTCGGAAGGCTAACCAGGTTTACATAATTGATTTTGGTCTTGCGAAAAGGTATCGGGACTCCACAACCAACCGCCACATCCCTTATAGGGAGAACAAAAACTTAACAGGGACTGCACGTTATGCAAGTTGCAATACTCATCTTGGGATTGAACAAAGCCGACGAGATGACTTGGAGTCACTGGGTTATGTTCTTCTGTACTTCCTGAGAGGAAGCCTTCCATGGCAAGGTCTAAAGGCTGCAACAAAGAAGCAGAAGTATGATAAAATATGTGAAAAGAAGTTGTCAACTCCCATTGAGGTCCTCTGCAAATCTCATCCTGTAGAGTTTGCTTCATACTTTCACTACTGCCACTCTCTGACTTTTGACCAGCGGCCTGATTATGGATTCTTGAAGCGTGTATTTCGGGAACTATTTACTCGAGAAGGTTATGAATTTGACTATGTATTTGATTGGACCATCTTGAAGTATCAGCAGGCACAAAAGAACAAATCTCAGCCACGCATACCTCCAATTACTGGAGCAAGCAACAGTCGTGCAATGCCAATGGATGTTGACAGACATCATGGTGATGTATCAGATCGCATTAGATCAGGCAATGCTACCAGTTCTGGTGTTAAATTGCAGTTTAAATCACCAATGGGCAAAAATTTAAGTTCTGAACATCCTTTTAAGAAGAATATTTTTGGAGAGGAGAATATGCCCTCTACTTCATATTCGCTTTCTGGTACCTCCAAGAGGGACTCCTTGAAGCCCATCGTGTCTGCTGAAGCTGCTAATTCTGGACATGAACATGGTAAAATTGGCCCTTCTAGCAGCTGGATTTCATCTCTGCATCGTGCCAAATGA 1263 0.426 MERIVGGKYKLGRKIGSGSFGEIYLATHIDTFEIVAVKIENTKTKHPQLLYEAKLYNILQGGSGIPSIKWSGVDGEENVLVLDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDSTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKLSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRVFRELFTREGYEFDYVFDWTILKYQQAQKNKSQPRIPPITGASNSRAMPMDVDRHHGDVSDRIRSGNATSSGVKLQFKSPMGKNLSSEHPFKKNIFGEENMPSTSYSLSGTSKRDSLKPIVSAEAANSGHEHGKIGPSSSWISSLHRAK 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1698 420 PANTHER CASEIN KINASE-RELATED 7 326 - -
Lele05g1698 420 Gene3D Transferase(Phosphotransferase) domain 1 1 326 - -
Lele05g1698 420 FunFam Casein kinase I isoform delta-like 1 340 - -
Lele05g1698 420 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Lele05g1698 420 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Lele05g1698 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Lele05g1698 420 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1698 420 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1698 420 MobiDBLite consensus disorder prediction 334 354 - -
Lele05g1698 420 MobiDBLite consensus disorder prediction 331 356 - -
Lele05g1698 420 MobiDBLite consensus disorder prediction 393 420 - -
Lele05g1698 420 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1698 420 CDD STKc_CK1_delta_epsilon 8 282 - -
Lele05g1698 420 MobiDBLite consensus disorder prediction 404 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1698 Lele-ChrLele05 11083168 11086914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1698 9 215 EF-hand Containing Proteins AT4G23650 29.577 1.64e-14 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Lele05g1698 Pkinase 4.9e-28 CL0016