Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1688 ATGGCTGAGCTACCCAGCTCAGAGATAGAGACAAGCATTCGCACTAACTGGTCTTCACTATCTCCATCGTCGTCGTCTTCATCGTTGTCTCAGTGTTTACCAAACTCTACTTCTGAGCCATTAGCTGCAGAACAGAGGAAGCTGAAACGAGGCAGAGATAGCAGCAACAGCAAACACCCTGTGTACAGAGGAGTTCGAATGCGGGCGTGGGGCAAGTGGGTGTCGGAAATCCGGGAGCCCAGGAAGAAGAATCGGATCTGGCTCGGCACCTTCGCCACGCCGGAGATGGCGGCGCGTGCCCACGATGTGGCCGCGATGGCCATCAAAGGCAACTCCGCCATTCTCAACTTCCCCGAACTCTCGGGTTCTCTGCCCCGACCCGCTTCCAACTCGCCCAGAGACGTTCAGGCTGCCGCAGCTAAGGCGGCTGCCATGGAAGTATTCAGTACCCCAACGGCGTCGATCTCGTCTTCCTCTTCATCGTCCTCATTGGCAATGTCCACCTCCTCGGGAGACTCCTCCGGCGACCCGTCCACCCCGGAGGAGGAACTCGGCGAGATAGTGGAGCTACCGCCTTTGGGAAGCAGTTTCGAGTCGCCAGACCCGGGTAACGAATTGGTGTTCTTTGACCCGGTGGATGGGTGGCTCTACCCTCACCCGTGGTATCACAGCATTTATGATGAAAAGGATTTTAGTGGTTATTTCCTTGGGGATGACACATTAATGCAAGAAGCAGCAGAAAGTGGATTCGAGAGCACCTTGTGGCAATATTAA 774 0.553 MAELPSSEIETSIRTNWSSLSPSSSSSSLSQCLPNSTSEPLAAEQRKLKRGRDSSNSKHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAAMAIKGNSAILNFPELSGSLPRPASNSPRDVQAAAAKAAAMEVFSTPTASISSSSSSSSLAMSTSSGDSSGDPSTPEEELGEIVELPPLGSSFESPDPGNELVFFDPVDGWLYPHPWYHSIYDEKDFSGYFLGDDTLMQEAAESGFESTLWQY 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1688 257 Gene3D AP2/ERF domain 61 119 IPR036955 GO:0003700|GO:0006355
Lele05g1688 257 PRINTS Ethylene responsive element binding protein signature 62 73 IPR001471 GO:0003700|GO:0006355
Lele05g1688 257 PRINTS Ethylene responsive element binding protein signature 84 100 IPR001471 GO:0003700|GO:0006355
Lele05g1688 257 MobiDBLite consensus disorder prediction 153 177 - -
Lele05g1688 257 MobiDBLite consensus disorder prediction 1 60 - -
Lele05g1688 257 MobiDBLite consensus disorder prediction 43 59 - -
Lele05g1688 257 CDD AP2 62 120 IPR001471 GO:0003700|GO:0006355
Lele05g1688 257 Pfam AP2 domain 60 110 IPR001471 GO:0003700|GO:0006355
Lele05g1688 257 SUPERFAMILY DNA-binding domain 61 118 IPR016177 GO:0003677
Lele05g1688 257 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 38 195 - -
Lele05g1688 257 MobiDBLite consensus disorder prediction 153 183 - -
Lele05g1688 257 ProSiteProfiles AP2/ERF domain profile. 61 118 IPR001471 GO:0003700|GO:0006355
Lele05g1688 257 FunFam Ethylene-responsive transcription factor 2 60 119 - -
Lele05g1688 257 MobiDBLite consensus disorder prediction 8 42 - -
Lele05g1688 257 SMART rav1_2 61 124 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1688 Lele-ChrLele05 11013286 11014059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1688 26 227 AP2-EREBP Transcription Factor Family AT5G11590 61.137 1.18e-68 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele05g1688 AP2 5.5e-14 CL0081