Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1676 ATGCCAACATTCAAGTGTTTTACTGTGAAAAGGTGTTCTGTGAGCTGCTGGAAGCAAGCATGGATATGTGGGAAACGAAATGATTCATTAGTTTTTTCCCCTCATTGGAACTGCTTACTGGCTAATGTTTCAGGTGATCGGTATTTGAGGCCATGGATTATTCCAGTGCCTGAGACCACTTTTACAACGAGAAGCGAGGAGGACGAATGCCTAATATTGGCAAGTGATGGGCTTTGGGATGTAATGACGAATGCAGAGGTTGGGGAAGTTGCGCGCCATATTCTGAGACGACGTCGAAGGTCCTTGTCCTTGGAAGAAACTCCACCCGCCCAAGTGGTGGCTGATAGCCTCACAGAGATTGCATGTGGTAGAAATAGTATAGACAATATATCGATCATAGTTATTGATCTGAAATCAAAGAGAAAACGTCAGCAAAGGCCTGCTTTGACTTCCTAA 456 0.4452 MPTFKCFTVKRCSVSCWKQAWICGKRNDSLVFSPHWNCLLANVSGDRYLRPWIIPVPETTFTTRSEEDECLILASDGLWDVMTNAEVGEVARHILRRRRRSLSLEETPPAQVVADSLTEIACGRNSIDNISIIVIDLKSKRKRQQRPALTS 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1676 151 Gene3D - 13 147 IPR036457 -
Lele05g1676 151 Pfam Protein phosphatase 2C 45 130 IPR001932 -
Lele05g1676 151 ProSiteProfiles PPM-type phosphatase domain profile. 1 137 IPR001932 -
Lele05g1676 151 SUPERFAMILY PP2C-like 41 138 IPR036457 -
Lele05g1676 151 CDD PP2Cc 31 137 IPR001932 -
Lele05g1676 151 PANTHER PROTEIN PHOSPHATASE 44 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1676 Lele-ChrLele05 10924572 10925027 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1676 45 146 PP2C-type Phosphatase Gene Family AT1G17550 50.000 1.81e-25 99.0