Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1674 ATGGGTTCCTCCGAAAAGGAAGTGTTAGAGAAGAAAGAGAAGAGTGGAAAAGAGAGATCTATAGCCATAATTTTCAGATATAGTGATTGGATTGATGTGGTTCTCATGATAATGGGAGCTTTAGGTGCAATTGGAGATGGCATGTCCACCAACGTATTGCTCATATTTGTTAGCCGTATTATGAACAGCTTGGGTTATGGCAATAATAACCACCAAAATAATGGCAATTTCATGGCCGAGGTCGAAAAGTGCGGTTTATATTTTGTCTACCTGGGATTAGCAGCCATGGTGGTGGCCTTCATGGAAGGGTATTGCTGGAGCAAAACAGGGGAGAGGCAGGTTCTGAGAATTCGATACAAGTACTTGGAAGCTGTGCTGAGACAAGAAGTGGGTTTATTCGATTCCCAAGAAGCGAACACCTCAGAAATCATCAATACAATATCAAAGGACACTTCTCTCATCCAAGAGGTTCTCAGTGAAAAGGTACCCTTATTCTTTATGCACTCATCATCGTTCATCTCAGGAGTTGCATTTTCTGCATACTTCTGTTGGAGGGTGACCTTAGCAGCATTCCCTACGCTGCTTTTGCTGATTATTCCTGGAATGCTTTATGGCAAATTCCTTATCTCTCTGTCAAAAAAGTCTTATAAGGAATATGGCAAAGCAAACACCATAGTAGAACAGGCTCTAAGCTCCATTAAAACTATATATTCCTTCACTGCTGAGAAGAGAATCATCCACAAGTATTCAGCTATATTGGACACAACTTCAAAGCTGGGAATCAAACAAGGCATAGCCAAGGGGCTTGCTGTAGGAAGCATGGGTCTGTCTTTTGCCATATGGGCTTTTCTTTCTTGGCATGGAAGCCGTTTGGTTATGTACAGAGGTCAAAGCGGTGGAAAAGTCTACGCAGCTAGCATCACCTTCATTATGAGTGGCCTATCACTTGGAGTGGTTCTTCCAGATCTCAAATACTTTACAGAAGCTTCTGTTGCAGCTTCACGCATATTTGAAGTGATTGATCGGATACCATCCATTGATGTTGAAGACACAAAAGGACTTGTGTTAGAACGCATAAGTGGGAAGCTAGAATTTGAGCATGTAAAATTCACATACCCTTCACGTCCAGAAACACTTGTACTCAGAGATTTCAATCTCACAGTTGAAGCAGGCAAAACTGTTGCTTTGGTTGGTGCTAGTGGAAGTGGAAAATCCACTGCAATTGCATTGTTGCAGAGATTTTATGATGCCAATGAAGGTGTTGTGAGAATTGATGGTGAAGACGTAAGAAGCTTACAATTGAAATGGATAAGAGCGAAAATGGGGTTAGTTAGTCAAGAACATGCACTGTTTGGAACATCTATAAAAGAAAATATCATGTTTGGGAAACCAGATGCCACCATAGATGAAGTAATTGCTGCAGCCACTGCTGCTAATGCTCATAACTTCATAAGGCAGCTTCCTCAAGGTTATGAGACCAAGATTGGAGAAAAGGGATCACTTCTATCAGGTGGACAAAAGCAGAGAATAGCCATTGCTAGAGCCATCATAAAGAATCCAGTAATTCTTCTACTTGATGAAGCAACCAGTGCTCTTGACCCTGAATCCGAATCACTTGTTCAAACTGCCCTTGATCAGGCCTCCATGGGAAGGACGACATTGGTTGTTGCCCACAAGCTATCTACTATTCGAAATGCAGATCTCGTAGCAGTTGTCAATTGTGGTTGTGTCATTGAAACAGGAACACATAATGAACTCATAAACCGACCAAATGGCCATTATGCAAAACTAGCAAAACTACAGAGACAACTAAGCTGTGATGACCAAGAAAAAAATCCAGAAATGGGTATTTCTTCTGCTGCAAGAAGCAGTGCTGGTAGACCAAGCACTGCCAGCACCGGCAAAGTCATAGCTGACGCCGGAAGCATGACTTCCGACCTCGCCAAAACCTCCACAGCAATCGCCTCTGTCTTCGAAATCCTTGACCGCAAATCACTAATCCCCAAGGCTGGAGATGGAACTAGTGGATGTAAGTTGGAGAAGATGAGTGGGAAGATAGAAATGAAAAACGTTGATTTCGCATATCCAAGCAGGAAGGAGACTCCAATTCTGCGACAATTTTGCTTGGAGGTGAAAGCAGGAACGAGTATTGGACTAGTTGGCAAGAGTGGGTGTGGAAAATCAACAGTGATAGCTTTGATTCAAAGGTTTTACGAGCCTGAGAGAGGATATGTCAAAGTGGATGGTGTGGACATAAGGGAATTAGACGCACATTGGTACAGACAACACACAGCACTTGTAAGCCAAGAGCCCGTAATATTCTCAGGCACCATACGTGACAACATCTTGTTTGGCAAGCAAAATGCATCAGAAAATGAGGTGGTCGAGGCTGCAAGGGCAGCAAATGCTCACGAGTTCATCTCGTCACTGAAGGATGGATATGAAACGGAATGTGGGGAGAGGGGAGTGCAATTGTCTGGAGGACAGAAGCAGAGAATAGCGATTGCAAGAGCAATAATAAGGAACCCAACAATACTACTGCTAGATGAAGCGACGAGTGCTTTAGATGTACAATCAGAACAGATAGTGCAGGAAGCACTTGATAGGATTATGGTTGGGAGGACCACCATTGTTGTTGCTCATAGACTTAATACCATTAAGCATCTTGACTCCATTGCTTATCTTGCAGACGGCAAGGTTATAGAGCGAGGAACCTATGCCGGCCTAAGGCACATGAAAGGAGCCTTCTTCAACCTTTCCACCCATCAAACTTAG 2775 0.4321 MGSSEKEVLEKKEKSGKERSIAIIFRYSDWIDVVLMIMGALGAIGDGMSTNVLLIFVSRIMNSLGYGNNNHQNNGNFMAEVEKCGLYFVYLGLAAMVVAFMEGYCWSKTGERQVLRIRYKYLEAVLRQEVGLFDSQEANTSEIINTISKDTSLIQEVLSEKVPLFFMHSSSFISGVAFSAYFCWRVTLAAFPTLLLLIIPGMLYGKFLISLSKKSYKEYGKANTIVEQALSSIKTIYSFTAEKRIIHKYSAILDTTSKLGIKQGIAKGLAVGSMGLSFAIWAFLSWHGSRLVMYRGQSGGKVYAASITFIMSGLSLGVVLPDLKYFTEASVAASRIFEVIDRIPSIDVEDTKGLVLERISGKLEFEHVKFTYPSRPETLVLRDFNLTVEAGKTVALVGASGSGKSTAIALLQRFYDANEGVVRIDGEDVRSLQLKWIRAKMGLVSQEHALFGTSIKENIMFGKPDATIDEVIAAATAANAHNFIRQLPQGYETKIGEKGSLLSGGQKQRIAIARAIIKNPVILLLDEATSALDPESESLVQTALDQASMGRTTLVVAHKLSTIRNADLVAVVNCGCVIETGTHNELINRPNGHYAKLAKLQRQLSCDDQEKNPEMGISSAARSSAGRPSTASTGKVIADAGSMTSDLAKTSTAIASVFEILDRKSLIPKAGDGTSGCKLEKMSGKIEMKNVDFAYPSRKETPILRQFCLEVKAGTSIGLVGKSGCGKSTVIALIQRFYEPERGYVKVDGVDIRELDAHWYRQHTALVSQEPVIFSGTIRDNILFGKQNASENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQKQRIAIARAIIRNPTILLLDEATSALDVQSEQIVQEALDRIMVGRTTIVVAHRLNTIKHLDSIAYLADGKVIERGTYAGLRHMKGAFFNLSTHQT 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1674 924 MobiDBLite consensus disorder prediction 616 633 - -
Lele05g1674 924 Pfam ABC transporter transmembrane region 36 310 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele05g1674 924 Gene3D - 676 924 IPR027417 -
Lele05g1674 924 Gene3D - 354 611 IPR027417 -
Lele05g1674 924 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 37 328 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele05g1674 924 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 353 601 IPR027417 -
Lele05g1674 924 Pfam ABC transporter 381 530 IPR003439 GO:0005524
Lele05g1674 924 Pfam ABC transporter 706 853 IPR003439 GO:0005524
Lele05g1674 924 SMART AAA_5 390 582 IPR003593 -
Lele05g1674 924 SMART AAA_5 713 905 IPR003593 -
Lele05g1674 924 MobiDBLite consensus disorder prediction 608 633 - -
Lele05g1674 924 CDD ABC_MTABC3_MDL1_MDL2 364 601 - -
Lele05g1674 924 Gene3D ABC transporter type 1, transmembrane domain 10 343 IPR036640 GO:0005524|GO:0016020
Lele05g1674 924 PANTHER ABC TRANSPORTER B FAMILY 6 600 - -
Lele05g1674 924 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 678 923 IPR027417 -
Lele05g1674 924 CDD ABC_6TM_Pgp_ABCB1_D1_like 36 336 - -
Lele05g1674 924 FunFam ABC transporter B family member 1 23 360 - -
Lele05g1674 924 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 686 922 IPR003439 GO:0005524
Lele05g1674 924 FunFam ABC transporter B family member 4 353 610 - -
Lele05g1674 924 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 363 599 IPR003439 GO:0005524
Lele05g1674 924 FunFam ABC multidrug transporter SitT 676 924 - -
Lele05g1674 924 ProSitePatterns ABC transporters family signature. 502 516 IPR017871 GO:0005524|GO:0016887
Lele05g1674 924 SUPERFAMILY ABC transporter transmembrane region 18 347 IPR036640 GO:0005524|GO:0016020
Lele05g1674 924 ProSitePatterns ABC transporters family signature. 825 839 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1674 Lele-ChrLele05 10915174 10921208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1674 638 916 Calmodulin-binding Proteins AT2G36910 51.601 2.96e-83 291