Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1666 ATGAAGGCACAGCCTTTTTCTGAGTTCCCCATTGGACACCTTCATGACCCTGTACTCTCTATCTGTTCTGCTGAGCAAATGGGAAGAGCCACCCGGTGGTTGAAGAGCTTGTTTGGGATAAAGAAAGACAGAAACCATGTTTTGGAGGGAGAACTCAGAGATTTTTGTCTCAATCCAACCACTATACCACCAAACATCTCGCCTGCAGAAGCTGCTTGGCTTCAATCGTTCTACACAGTAACAGAGAAGCAGCAGAACAAGCACGCCATTGCGGTGGCCGCAGCCACTGCAGCCGCCGCTGATGCAGCCGTAGCAGCCGCTCAGGCTGCCGTGGCCGTTGTCAGGCTCACCAGCCATGGCAGAGGCACCATGTTCGGCAGTGGTGGACACGAGAGAGGGGCTGCCGTTAAGATTCAAACAGTATTTAGGGGTTACTTGGCAAGAAAGGCACTGAGAGCTTTGAAAGGATTGGTGAAATTACAAGCACTTGTGAAAGGCTATTTAGTGAGGAAGCAAGCGACGGCAACATTGCATGGTATGCAAGCTCTTGTCAGAGCCCAAGCCACTGTGAGGTCTCAGAAAGCTCGCAGGCTCATGAACAGAGACAATGAAGCTTATAGATTTGAACCTCGAGCGCGAAGATCCAGGCAGAGATTTGACGACACTAGGAGTGAGTACACAGCACCGGTTCACAGCAGAAGGATGTCTTCTTCTTTTGATGCAACAATAAATAACTCTAACAGCTTCGATGGAAGTCCCAAGATATTGGAAGTAGACACTGGTAGGCCAAGATCGAGGTCTCGGAGGACCAACACCTCTTCAATTTCAGATTTTGGCGATGACCCACAATTCCAAGCACTTTCCTCTCCTCTTCCAGTCCCTTGTTGTCGTACCCCAGCTCGCCTTTCGATCCCGGACTGTCACCGGAATCTTCAGGACTCCGATTGGGGGTTGACGGTGGAAGAATGCAGGTCGTGTACGGCACAGAGCACTCCTCGGTTCACCAATTCTTGTGGGTCGTTTAGTTGTAATTCTACGGATTGCAGAAGCGTTTGCGCCGGCGATGGATTTTACCGGCAATACGGGAATTTCCCGAACTACATGGCGAAAACTCAGTCATTCAGGGCGAAATTGAGGTCTCACAGTGCTCCAAAGCAGAGGCCTGAACCGAAGAGGAGGGTATCGTTGAACGAATTGATGGAGTGTAGGAGCAGTTTGAGCGGTGTTCGAATGCAGAGATCTTGCTCTCAGGTTCAAGAAGCCATTAGCTTCAAGAATGCAGTAATGGGTAAGCTAGAAAAGTCTGCAGAATTTGGAAGGGAAAGGGATAGTAACTACTGGCAGAGGAGATGGTGA 1356 0.4985 MKAQPFSEFPIGHLHDPVLSICSAEQMGRATRWLKSLFGIKKDRNHVLEGELRDFCLNPTTIPPNISPAEAAWLQSFYTVTEKQQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMFGSGGHERGAAVKIQTVFRGYLARKALRALKGLVKLQALVKGYLVRKQATATLHGMQALVRAQATVRSQKARRLMNRDNEAYRFEPRARRSRQRFDDTRSEYTAPVHSRRMSSSFDATINNSNSFDGSPKILEVDTGRPRSRSRRTNTSSISDFGDDPQFQALSSPLPVPCCRTPARLSIPDCHRNLQDSDWGLTVEECRSCTAQSTPRFTNSCGSFSCNSTDCRSVCAGDGFYRQYGNFPNYMAKTQSFRAKLRSHSAPKQRPEPKRRVSLNELMECRSSLSGVRMQRSCSQVQEAISFKNAVMGKLEKSAEFGRERDSNYWQRRW 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1666 451 SMART iq_5 130 152 IPR000048 GO:0005515
Lele05g1666 451 SMART iq_5 153 174 IPR000048 GO:0005515
Lele05g1666 451 ProSiteProfiles IQ motif profile. 180 207 IPR000048 GO:0005515
Lele05g1666 451 ProSiteProfiles IQ motif profile. 131 159 IPR000048 GO:0005515
Lele05g1666 451 ProSiteProfiles IQ motif profile. 155 182 IPR000048 GO:0005515
Lele05g1666 451 MobiDBLite consensus disorder prediction 211 283 - -
Lele05g1666 451 MobiDBLite consensus disorder prediction 229 253 - -
Lele05g1666 451 Pfam IQ calmodulin-binding motif 158 172 IPR000048 GO:0005515
Lele05g1666 451 Pfam IQ calmodulin-binding motif 134 152 IPR000048 GO:0005515
Lele05g1666 451 Gene3D - 130 179 - -
Lele05g1666 451 Pfam Protein of unknown function (DUF4005) 329 408 IPR025064 -
Lele05g1666 451 MobiDBLite consensus disorder prediction 211 228 - -
Lele05g1666 451 MobiDBLite consensus disorder prediction 267 283 - -
Lele05g1666 451 PANTHER IQ-DOMAIN 5-RELATED 27 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1666 Lele-ChrLele05 10825267 10828006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1666 27 411 IQD Protein Family AT3G16490 49.492 2.97e-89 275