Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1665 ATGTCAAATCTTCATTATGTTTTAAATTTTTTGCTACTTGTTTTTCTTCTTCTGATGCAAAATCCGACTACAACGCTGTGTCATACAAAGGAATTGCGACCAAGGCGTGCTTCTGTGACATCATCGACGACTAACATGACCAGAATCCAATTCTCAGAACAGCAATTCATGAAATGGATCAAGTTCGTTGGTGGCCTCAGACACTCTGTTTTTGGGATAGCCAAAAACAAGCTTTTTCCTTCTTACACTCTGCATGTCTCCAAGAAGCCTTCTTTGACTCAATTTTCGACAATTCAACGCGCAATCGATTCTCTTCCATTCCTCAATCTTGTTAGAGTCGTCATAAAAGTCCATCCAGGGGTTTACACGGAGAAAGTGAACATTCCTCCTATGAAATCCTTCATAACCATACAAGGAGCAGGAGCAGACAAAACCATAGTTCAATGGGGAGACACAGCTCAAACAAAAGGACCAGATGGGAAGCCACTGGGAACCTTTGGATCAGCAACATTTGCTGTAAATGCACCTTATTTCATCGCCAAGAACATCACATTCAAAAACACAGCCCCAATTTCAGCACCAAGAGCAGTAGGAAAGCAAGCAGTGGCATTGAGAATATCAGCAGACACAGCTACATTCCTGGGGTGTAAATTCTTAGGAGCACAAGACACATTGTATGATCATGTGGGAAGACATTATTATAAAGACTGTTACATCGAAGGCTCCGTAGATTTCATATTCGGGGACGGCCTATCTCTGTTCGAGAGGTGTCACGTACATGCAATAGCGCAGAACATAGGGGCCTTAACAGCACAGGGAAGGAACAGTATATTGGAGGACACAGGGTTTTCATTCTTGCACTGTAAGGTCACGGGTTCAGGGGCACTGTACCTAGGTAGGGCATGGGGTCCCTTTTCTCGCGTGGTCTTTGCTTACACCAATATGGACAATATCATCATTCCCAAGGGCTGGTACAACTGGGGTGACCCTAACCGTGAAATGACTGTGTTCTACGGACAATACAAATGCACAGGACCAGGAGCCAGATTTGCAGGCAGAGTAGCTTGGTCAAGAGAGCTCACAGATGAGGAAGCTAAGCCTTTTATATCACTTAGCTTCATTGATGGATTTGAATGGATCAAATTGTAG 1149 0.4386 MSNLHYVLNFLLLVFLLLMQNPTTTLCHTKELRPRRASVTSSTTNMTRIQFSEQQFMKWIKFVGGLRHSVFGIAKNKLFPSYTLHVSKKPSLTQFSTIQRAIDSLPFLNLVRVVIKVHPGVYTEKVNIPPMKSFITIQGAGADKTIVQWGDTAQTKGPDGKPLGTFGSATFAVNAPYFIAKNITFKNTAPISAPRAVGKQAVALRISADTATFLGCKFLGAQDTLYDHVGRHYYKDCYIEGSVDFIFGDGLSLFERCHVHAIAQNIGALTAQGRNSILEDTGFSFLHCKVTGSGALYLGRAWGPFSRVVFAYTNMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGPGARFAGRVAWSRELTDEEAKPFISLSFIDGFEWIKL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1665 382 Pfam Pectinesterase 93 376 IPR000070 GO:0030599|GO:0042545
Lele05g1665 382 Gene3D - 80 382 IPR012334 -
Lele05g1665 382 FunFam Pectinesterase 80 382 - -
Lele05g1665 382 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 76 381 - -
Lele05g1665 382 SUPERFAMILY Pectin lyase-like 79 381 IPR011050 -
Lele05g1665 382 ProSitePatterns Pectinesterase signature 2. 239 248 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1665 Lele-ChrLele05 10820793 10822748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1665 1 380 Carbohydrate Esterase AT5G47500 43.045 1.35e-102 306