Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1654 ATGGGCTTAAGGGCGTTGTGGGCCACTTATCATCTGTACTCTGAGAAAAGAAAGTGGCTTTCATTGTTGGCCCATACACGTCTCATCCTTCGTCAACGATGCTGGCTGCTCTACATTGCCTTTGCTTCTCTCCTAAGGAGTAGGTTTTTTAATTCGCTGTCTGGGATGAAGATTGAGCAATTAGACGATGTGGATTCCAGTAGGGATGAAGGGAGTAATGAGAACCAGATTGTGAAGGTTGATGACGCAAAGAGGGCGTTAGTTGGAGCCGGGGCTCGGATCCTGTTTTACCCGACGCTTTTGTATAATGTACTTCGGAACAAGATTGAAGCTGAGTTCAGGTGGTGGGATCAAGTCGATGAGTTTTTATTATTGGGTGCTGTTCCATTCCCTAAAGATGTTCCACGCTTGAAGAAGCTTGGTGTGGGTGGTGTAATTACTCTGAATGAACCTTATGAAACGCTGGTTCCATCATCATTGTATCATGCTCATGAGATTGATCATTTAGTGATTCCTACAAGGGATTATCTCTTTGCTCCTTCACTAGAGGATATTAGCCGAGCTGTGCAATTCATTCATCAAAATGCATGTTGCGGTAAAACTACTTATGTTCATTGTAAAGCTGGTCGAGGAAGGAGCACAACAATTGTTCTTTGTTATTTGGTTGAATATAAGCACATGACACCCGCAACTGCCCTGGATTATGTGCGGTCTCGCAGACCTAGGGTGCTGCTAGCACCATCGCAGTGGAAGGCTGTTCAAAACTACAGCAAGTGCCGACATTCACCTTCTAGTGCCAGGCCTACTACTCCTACGCCATATTCTCCTTCTAGGGATGCAGTTCTTATAACCCAAGCTGATCTTGAGGGTTACCATAAGGCATGCGATGCTGGTATGCAGTTGGCCATCGTTACTAAAGTGCCAAAGGCCAAGCCCATGATAGCGAGATTATCTTGCCTGTTTGCGTCCCTTAAAGTTTCTGGTAGCGGTGTCCCAGCACTCAGACGGTTGCCAATTTCCGAGGCACGTGCTTGCTAA 1038 0.4605 MGLRALWATYHLYSEKRKWLSLLAHTRLILRQRCWLLYIAFASLLRSRFFNSLSGMKIEQLDDVDSSRDEGSNENQIVKVDDAKRALVGAGARILFYPTLLYNVLRNKIEAEFRWWDQVDEFLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYHAHEIDHLVIPTRDYLFAPSLEDISRAVQFIHQNACCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPATALDYVRSRRPRVLLAPSQWKAVQNYSKCRHSPSSARPTTPTPYSPSRDAVLITQADLEGYHKACDAGMQLAIVTKVPKAKPMIARLSCLFASLKVSGSGVPALRRLPISEARAC 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1654 345 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 183 251 IPR000387 GO:0016311|GO:0016791
Lele05g1654 345 ProSiteProfiles Dual specificity protein phosphatase domain profile. 115 262 IPR020422 GO:0006470|GO:0008138
Lele05g1654 345 FunFam Dual specificity phosphatase domain protein 115 262 - -
Lele05g1654 345 ProSitePatterns Tyrosine specific protein phosphatases active site. 204 214 IPR016130 GO:0016311|GO:0016791
Lele05g1654 345 SMART dsp_5 118 259 IPR020422 GO:0006470|GO:0008138
Lele05g1654 345 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 56 323 - -
Lele05g1654 345 Gene3D Protein tyrosine phosphatase superfamily 115 261 IPR029021 -
Lele05g1654 345 CDD PTPMT1 115 258 IPR044596 GO:0004721
Lele05g1654 345 Pfam Dual specificity phosphatase, catalytic domain 137 257 IPR000340 GO:0008138|GO:0016311
Lele05g1654 345 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 109 258 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1654 Lele-ChrLele05 10757027 10761121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1654 56 325 Protein tyrosine phosphatase (PTP) family AT2G35680 51.582 3.61e-100 297