Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1653 ATGCAGGACTGGTTAGGTCTTCCGGCTGGCGTGAAGTTTGATCCAACGGATCAAGAACTAATCGAACACCTCGAAGCCAAAGTGGAATCCAAGAACATGAAATCTCACCCTTTGATCGATGAGTTCATTCCTACAATTGAAGGAGAAGACGGAATTTGTTATACCCATCCTGAGAAACTCCCAGGAGTAACAAGAGACGGGTTGAGTAGGCACTTCTTTCACAGGCCGTCGAAGGCTTACACGACCGGAACAAGAAAGAGGAGAAAAATACAGAATGAAAGCGAGATGCAAGGCGGAGAAACGAGGTGGCACAAGACAGGGAAGACGAGGCCGGTGATGGTGAACGGAAAGCAAAAGGGCTGCAAGAAGATTCTAGTACTCTACACCAACTTCGGAAAGAACCGAAAACCCGAGAAGACCAGCTGGGTCATGCATCAGTACCACCTCGGCCAGCACGAGGAGGAGAAAGAAGGAGAGCTCGTCGTCTCCAAGATTTTCTACCAGACACAGCCCCGACAGTGTAATTGGTCCGATCGAACGTCCACCGCCACCGGCGAACCCAGCGCCGACTTCGTTAATACCAATAGTAGTAGAAGAGACAGTGGCAGTGGCAGTTGCTCTTCTTCCAAGGAGATCAACAACATTGTTGTTACAGCTCCCAGAGATGATCAGATGTCGGCGGTGGTTGGAGTTGTCCCTCCCATGTCATCCTACGTCCATCATCATCATGCGTTGGACATTCAACAACCTCTCAAACCCGACCACTTTGGGTTCATTCCCTTCAGGAAAAGCTTCGACGAGCAACAGCAGCAGCAACATCATAAACTAGGAGGGAGCTCTGCGTCTGGTTTGGAGGAACTCATAATGGGATGCACTTCGTCAACTGATATTAAAGCGGAATCATCCGTCTCCGTCACAAACCCGCAAGAAGCTGAATGGCTCAAGTACTCTTACTGGCCCGACCCCGACAACCCGGATCATCACGGGTAA 990 0.501 MQDWLGLPAGVKFDPTDQELIEHLEAKVESKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNESEMQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTSWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDRTSTATGEPSADFVNTNSSRRDSGSGSCSSSKEINNIVVTAPRDDQMSAVVGVVPPMSSYVHHHHALDIQQPLKPDHFGFIPFRKSFDEQQQQQHHKLGGSSASGLEELIMGCTSSTDIKAESSVSVTNPQEAEWLKYSYWPDPDNPDHHG 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1653 329 MobiDBLite consensus disorder prediction 86 107 - -
Lele05g1653 329 SUPERFAMILY NAC domain 2 168 IPR036093 GO:0003677|GO:0006355
Lele05g1653 329 ProSiteProfiles NAC domain profile. 7 168 IPR003441 GO:0003677|GO:0006355
Lele05g1653 329 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 2 294 IPR044799 GO:0003700
Lele05g1653 329 Gene3D NAC domain 16 172 IPR036093 GO:0003677|GO:0006355
Lele05g1653 329 Pfam No apical meristem (NAM) protein 8 149 IPR003441 GO:0003677|GO:0006355
Lele05g1653 329 MobiDBLite consensus disorder prediction 80 108 - -
Lele05g1653 329 MobiDBLite consensus disorder prediction 177 209 - -
Lele05g1653 329 FunFam NAC domain-containing protein 73 16 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1653 Lele-ChrLele05 10750162 10753430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1653 3 326 NAC Transcription Factor Family AT5G56620 52.910 4.40e-115 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele05g1653 NAM 2e-24 No_clan