Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1629 ATGAGCCCCCACACTCGCCTCGAAGACGCAGACGAAATCATTGAGGATGCTGCTGCGAGCTCCAACCACGACGACTCCATGTGCGAGCTCGATGGTTCCGTAGACAAAGCCGTTGAAGGCTCAGCTGGCGAGCCTTCCACTGTCTTTATCGGTTCAGATGACAAAACAAGTGCCGATTATTACTTCGATTCCTACTCTCATTTTGGAATTCACGAAGAAATGTTGAAGGATACTGTGAGAACTAAGACATACCAAAATGTGATTTATCAGAATAAATTTTTATTCAAGAATAAAGTAGTTCTTGACGTGGGTGCTGGGACTGGAATTTTATCTCTCTTCTGTGCCAAAGCTGGGGCAGAACATGTCTATGCGGTGGAATGCTCTGACATGGCTGACATGGCAAAGGAGATAGTTGAAACTAATGGATATTCTAATGTTATAACAGTTCTGAAGGGAAAGATTGAAGAAATTGATCTTCCTGTTTCTAAAGTTGACATAATCATTTCAGAATGGATGGGATACTTCTTGTTGTTTGAGAATATGCTTAATACTGTTCTCTATGCACGTGACAAGTGGCTAGCTTTAGGGGTCACTGGGAAATATCGATTTGCATCGCTTGAGGTGCCATTTTGGAATAATGTATATGGATTTGACATGAACTGCATTAAGAAGCAAGCAATTATGGAGCCTCTTGTTGACACAGTTGACAAAAATCAGATTGTTACAAATTGCCAACTACTCAAGAATTTCTTGTTTTCTTTGAGTGATGGCAAGTTGCGAACTGATTTGCTCATCTCTGTTCAGACAATGGATATCTCTAAAATGGTACCTGGAGATGCGTCCTTCACTGCACCTTTTAAGCTTGTAGCTGCACGTGATGATTATATTCATGCTCTTGTGGCATATTTTGATGTATCATTTACCAGGTGTCATAAATTGACGGGTTTCTCTACAGGACCAATATCCCATGCGACTCATTGGAAGCAAACAGTGCTTTACCTAGAAGACGTTTTGACCATATGTGATGGGGAGGCCATTGCGGGAAGCATGACCGTGGCCCAAAATAAGCAAAATCCTCGAGATGTTGACATAATGCTCAAGTATTCATTAAATGGTCGACGATGCGTGGTTTCAAGAGTTCAGTATTACAAGATGCGCTGA 1161 0.416 MSPHTRLEDADEIIEDAAASSNHDDSMCELDGSVDKAVEGSAGEPSTVFIGSDDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYQNKFLFKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSDMADMAKEIVETNGYSNVITVLKGKIEEIDLPVSKVDIIISEWMGYFLLFENMLNTVLYARDKWLALGVTGKYRFASLEVPFWNNVYGFDMNCIKKQAIMEPLVDTVDKNQIVTNCQLLKNFLFSLSDGKLRTDLLISVQTMDISKMVPGDASFTAPFKLVAARDDYIHALVAYFDVSFTRCHKLTGFSTGPISHATHWKQTVLYLEDVLTICDGEAIAGSMTVAQNKQNPRDVDIMLKYSLNGRRCVVSRVQYYKMR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1629 386 Gene3D Vaccinia Virus protein VP39 49 196 IPR029063 -
Lele05g1629 386 FunFam probable protein arginine N-methyltransferase 1 49 198 - -
Lele05g1629 386 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 24 373 IPR025799 GO:0016274|GO:0018216
Lele05g1629 386 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 64 385 IPR029063 -
Lele05g1629 386 CDD AdoMet_MTases 100 169 - -
Lele05g1629 386 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 58 367 IPR025799 GO:0016274|GO:0018216
Lele05g1629 386 Pfam Ribosomal protein L11 methyltransferase (PrmA) 95 169 - -
Lele05g1629 386 Gene3D - 197 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1629 Lele-ChrLele05 10602161 10606050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1629 35 349 C2H2 Transcription Factor Family AT3G12270 35.714 1.61e-59 201