Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1624 ATGGACTTAACCTCCGCCGCAATTAACAACATCGCCGCCTCCAATACGACCGGTACTAAATCCCCAGAACCTGACAGTGAAATTCCGACCCGGATCCAACCCGCGCCCGCCAAGTCCTTGCCCTTCTCCAACGGCGTCCTGAAGCGCCATCATCCCCACCACAAGCATCCCGTGCAGGTCACCTACAAAGAATGCTTGAAAAACCATGCAGCCAGCTTGGGAGGCCACGCCCTCGACGGTTGTGGCGAATTCATGCCTTCTCCGAATGCCAATTCAGCCGACCCCAGCTCCATCAAATGCGCCGCCTGTGGCTGCCACCGCAACTTCCATCGCCGTGAGTCCGATGAGCCCATTTCCACCGCCACCCACGTCATCGAGTATCAGCCCCACCATCGGCACCACCCCCCGCCACCGCTGTTCCAAGCTTCGAATCGGAGCCCCAATTCAGCTTCCCCGCCCCCGATCTCATCTTCCTACTACCCTTCCGCGCCCCACATGCTCCTGGCTCTCTCCGCCGGTTTATCTGCCCATCCGGAGAGCACGGCAGCTCCGGTGAATCTTTTGGGTACGCCGACTTTGACTTCTAGGAAGCGGTTCAGGACCAAGTTCACCCAAGAGCAGAAGGATAAAATGTACCAGTTTGCCGAGAGAGTGGGGTGGAAGATGCAGAAAAGAGACGACGATTTGGTGCAAGAGTTCTGCCACGATATCGGGGTAGATAGAAGCGTTTTGAAGGTTTGGATGCACAATAATAAGAACACTTTGGGGAAGAAAGACGCCGTGAATGGGAATAGAAACGTTCTCGAGCAAGACCCAGACAACAATCATGACAATGAAACCACCGGCAACAACAACAACGGCAGCACCCACCAGGATCCGAATCATCCCTACCAGAACGATAGTAGGGCAAACGCCGGTACTAATGGGTCGTCTTCGTCTTCTTAA 945 0.5513 MDLTSAAINNIAASNTTGTKSPEPDSEIPTRIQPAPAKSLPFSNGVLKRHHPHHKHPVQVTYKECLKNHAASLGGHALDGCGEFMPSPNANSADPSSIKCAACGCHRNFHRRESDEPISTATHVIEYQPHHRHHPPPPLFQASNRSPNSASPPPISSSYYPSAPHMLLALSAGLSAHPESTAAPVNLLGTPTLTSRKRFRTKFTQEQKDKMYQFAERVGWKMQKRDDDLVQEFCHDIGVDRSVLKVWMHNNKNTLGKKDAVNGNRNVLEQDPDNNHDNETTGNNNNGSTHQDPNHPYQNDSRANAGTNGSSSSS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1624 314 MobiDBLite consensus disorder prediction 129 156 - -
Lele05g1624 314 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 62 113 IPR006456 -
Lele05g1624 314 MobiDBLite consensus disorder prediction 1 54 - -
Lele05g1624 314 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 61 113 IPR006456 -
Lele05g1624 314 Gene3D - 190 257 - -
Lele05g1624 314 MobiDBLite consensus disorder prediction 277 314 - -
Lele05g1624 314 FunFam Zinc-finger homeodomain protein 2 188 257 - -
Lele05g1624 314 SUPERFAMILY Homeodomain-like 192 257 IPR009057 -
Lele05g1624 314 Pfam ZF-HD protein dimerisation region 60 114 IPR006456 -
Lele05g1624 314 MobiDBLite consensus disorder prediction 257 314 - -
Lele05g1624 314 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 48 255 - -
Lele05g1624 314 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 196 253 IPR006455 -
Lele05g1624 314 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1624 Lele-ChrLele05 10556689 10557633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1624 20 287 ZF-HD Transcription Factor Family AT3G28920 58.741 1.89e-77 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele05g1624 ZF-HD_dimer 1.8e-28 No_clan