Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1616 ATGGCGGAAGCTGCAGAGCCCAAAGCAGTGGCGGAGGCAGAGAAGAAGAAGGAGCAGAGTTTACCCTTTTACCAGCTATTCTCTTTTGCAGATAAGTATGACTGGTTGCTAATGCTCTGTGGCAGCTTGGGAGCTGTCGTTCATGGCTCCTCCATGCCGGTTTTCTTTCTTCTTTTCGGTGAAATGGTTAATGGGTTTGGCAAGAACCAGATGGATTTGAAGAAAATGACTGACGAAGTATCAAAGTATGCTCTGTATTTTGTGTACCTGGGCCTTGTCGTTTGCGTATCATCGTATGCGGAAATTGCTTGTTGGATGTATACCGGGGAGAGGCAAGTGAGCACGTTGAGGAAGAAGTATTTGGAGGCGGTGCTTAAACAGGACGTTGGGTTCTTCGACACAGACGCTAGAACAGGGGATATTGTTTTCAGTGTTTCCACTGATACTCTGCTTGTTCAAGATGCTATCAGCGAGAAGGTAGGAAACTTCATACACTATCTCTCAACTTTTCTGGCGGGTTTAGTGGTCGGTTTTGTGTCGGCATGGAGGCTGGCGCTTCTGAGTGTGGCGGTGATTCCCGGCATTGCTTTCGCCGGTGGCTTGTACGCTTATACACTCACTGGCCTCACTTCAAAGAGTCGTCAATCCTATGCCAATGCCGGCATAATCGCCGAGCAGTCGTTTTCAAATTTAGGGGCTTTCAGTAAAGGTAAAGCTGCTGGATACAAGTTGATGGAGATTATCAATCATAGACCTTCCATAGTGGAAGATGCATCAGATGGAAGGTTGATGCATAGCAAAACTGTGTTACTGTACCCAAGGACGTATTCGTCACTGATTAGATTCCAAGAAATGGTCGGAAACAGAGACTTGTCCAACCCATCAACTCGCCGGACTCGTTCATCTCGGCTGAGCCATTCGCTTTCCACCAAGTCTTTGAGCCTCCGGTCGGGGAGCTTGAGGAATCTGAGCTACCAGTACAGCGCCGGAGCAGATGGTCGGATTGAGATGATATCAAATGCAGAAACGGACAAGAAAAATCCGGCTCCTCAGGGTTATTTCTTCCGACTGCTCAAGTTAAATGGCCCAGAATGGCCTTACTCAATCATGGGAGCTGTAGGCTCTGTTCTCTCTGGGTTCATAGGCCCAACATTTGCTATCGTGATGAGCAACATGATCGAGGTATTTTACTATAAGAATTACGCATCCATGGAGAAAAAGACCAAGGAGTTTGTCTTCATATACATCGGAGCTGGTCTCTATGCGGTGGGCGCGTATTTGACCCAACATTACTTCTTCAGTATAATGGGAGAAAATCTCACCACAAGGGTTCGAAGAATGATGCTTGCCGCAATATTAAGGAATGAAGTTGGATGGTTCGATGAGGAGGAACACAATTCGAGCCTGGTTGCAGCGAAGCTAGCGACGGATGCTGCAGATGTGAAGTCGGCGATTGCTGAGAGGATCTCAGTGATTCTGCAGAACATGACGTCTCTGTTAACTTCATTTATAGTAGCTTTTATCGTGGAATGGAGGGTTTCTTTGCTCATCCTTGCGACCTTCCCTTTACTTGTTCTGGCTAATTTTGCCCAGGCTTTTCTTCGGATATTGTCGCAAGCACGATCAAGTTGGCCTTTCCGATGGGCTTTCTGGCCATCTGTGGCTATCATCAAGAATGTCAACCTGGCTCCGAGTTTGGCAAGCAAATCTAGGCTTTCTAACCTTCTTCTCTCCTTTCTTTCGTACAGAGAACAATGTCGTTCCCGGCAGGCGAAGTCGAGACTACATGGCGAGTATGAATCAAAGAGCAGGAATCTTGGCTTCCATGGTGAGACAGAAGGAGAGACGATGGGCTGGGAAACATCAGCTCATCCTCTTTGGTCCTGGACACTGACTCGTGGTGGCGTAACTGTATGGATCTTGTTTGCTCTCCAAGATCAGCTCATCCTCTTGTGGGCTATGGCCTTCTTCGAAGCTGCTCTTCGTTTGGGTTTACCACTCGATCCTGCCTTATGTTTCGCTCTTTATGGCCTTTTCTTTATGTAA 2046 0.4731 MAEAAEPKAVAEAEKKKEQSLPFYQLFSFADKYDWLLMLCGSLGAVVHGSSMPVFFLLFGEMVNGFGKNQMDLKKMTDEVSKYALYFVYLGLVVCVSSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRQSYANAGIIAEQSFSNLGAFSKGKAAGYKLMEIINHRPSIVEDASDGRLMHSKTVLLYPRTYSSLIRFQEMVGNRDLSNPSTRRTRSSRLSHSLSTKSLSLRSGSLRNLSYQYSAGADGRIEMISNAETDKKNPAPQGYFFRLLKLNGPEWPYSIMGAVGSVLSGFIGPTFAIVMSNMIEVFYYKNYASMEKKTKEFVFIYIGAGLYAVGAYLTQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAAKLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILATFPLLVLANFAQAFLRILSQARSSWPFRWAFWPSVAIIKNVNLAPSLASKSRLSNLLLSFLSYREQCRSRQAKSRLHGEYESKSRNLGFHGETEGETMGWETSAHPLWSWTLTRGGVTVWILFALQDQLILLWAMAFFEAALRLGLPLDPALCFALYGLFFM 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1616 681 Pfam ABC transporter transmembrane region 40 231 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele05g1616 681 Pfam ABC transporter transmembrane region 369 530 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele05g1616 681 SUPERFAMILY ABC transporter transmembrane region 26 231 IPR036640 GO:0005524|GO:0016020
Lele05g1616 681 CDD ABC_6TM_Pgp_ABCB1_D2_like 358 539 - -
Lele05g1616 681 Gene3D ABC transporter type 1, transmembrane domain 40 269 IPR036640 GO:0005524|GO:0016020
Lele05g1616 681 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 369 529 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele05g1616 681 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 41 231 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele05g1616 681 PANTHER ABC TRANSPORTER B FAMILY 340 539 - -
Lele05g1616 681 SUPERFAMILY ABC transporter transmembrane region 350 530 IPR036640 GO:0005524|GO:0016020
Lele05g1616 681 MobiDBLite consensus disorder prediction 290 310 - -
Lele05g1616 681 Gene3D ABC transporter type 1, transmembrane domain 315 544 IPR036640 GO:0005524|GO:0016020
Lele05g1616 681 CDD ABC_6TM_Pgp_ABCB1_D1_like 38 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1616 Lele-ChrLele05 10461932 10473353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1616 370 526 Calmodulin-binding Proteins AT2G36910 29.630 1.54e-12 69.3