Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1614 ATGGCCTTCCCTCCTCACACCTTCCTCTTCCAGGCCCACGAAGATCACGATCACCTACCTTCCACCTCCATCAACGCCTACACCTCCTCCTTCACTCCCAAGCTCTTCGAAGGGGGTGCAGTGCCTTTGATGTTGAAGAGATCCATGTCGTTTTCAGGGATGGAGAACAAGCATGAAGATGAAGATCTTTCTGATGATGGATCTCAGATGATGGGGGATAAGAAGAAGAGACTGAACATGGAACAAGTGAAGGCACTGGAAAAGAGCTTCGAGTTAGGGAACAAGCTGGAGCCCGAGCGCAAAATGCATCTGGCCAAGGCTCTGGGCCTTCAGCCAAGGCAGATCGCTATTTGGTTCCAGAATAGGAGGGCCAGATGGAAAACCAAGCAGCTCGAGAAGGAATATGAAGCTCTCAAGAGGAAGTTTGAAGCTCTCAAGGCCGATAACGTTGCCCTTAAGGCTCATAACCACAAATTACACGCTGAGTTACAAGCTCTAAAGGGGAGAGATTGCTGTGAAGGCGGAACTATCAACCTTAAGAAAGAACCTGAGGTATGTTGGAGCAATGGGAGTACTGAGAATAGCTCGGGTATAAACTTGGATCTCTCAAGATCACAATTTATAAACAGCACTGTAACTTCAGTACAGGATGGTAAAAGCCTACTTAAGCCAACCAGCATAACCCAGCTCCTCCAATGCTCACCAAGATCATCAGAACTACAAGATGAAAGCTTCTCCAACATGTTTCACGGCGGCGGCGGCGGCGGCGTCGATGAGCACCAGAATTTCTGGCCCTGGCCAGAGCACCACCAGTTTCATTGA 822 0.4903 MAFPPHTFLFQAHEDHDHLPSTSINAYTSSFTPKLFEGGAVPLMLKRSMSFSGMENKHEDEDLSDDGSQMMGDKKKRLNMEQVKALEKSFELGNKLEPERKMHLAKALGLQPRQIAIWFQNRRARWKTKQLEKEYEALKRKFEALKADNVALKAHNHKLHAELQALKGRDCCEGGTINLKKEPEVCWSNGSTENSSGINLDLSRSQFINSTVTSVQDGKSLLKPTSITQLLQCSPRSSELQDESFSNMFHGGGGGGVDEHQNFWPWPEHHQFH 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1614 273 ProSitePatterns 'Homeobox' domain signature. 104 127 IPR017970 GO:0000981|GO:0006355
Lele05g1614 273 CDD homeodomain 74 130 IPR001356 GO:0003677
Lele05g1614 273 PRINTS Lambda-repressor HTH signature 109 125 IPR000047 GO:0003677
Lele05g1614 273 PRINTS Lambda-repressor HTH signature 100 109 IPR000047 GO:0003677
Lele05g1614 273 SUPERFAMILY Homeodomain-like 68 131 IPR009057 -
Lele05g1614 273 SMART HOX_1 72 133 IPR001356 GO:0003677
Lele05g1614 273 FunFam Homeobox-leucine zipper protein ATHB-13 65 133 - -
Lele05g1614 273 Pfam Homeobox associated leucine zipper 129 168 IPR003106 GO:0006355|GO:0043565
Lele05g1614 273 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 47 259 IPR045224 GO:0003700
Lele05g1614 273 Gene3D - 66 139 - -
Lele05g1614 273 Pfam Homeodomain 74 127 IPR001356 GO:0003677
Lele05g1614 273 Coils Coil 121 155 - -
Lele05g1614 273 ProSiteProfiles 'Homeobox' domain profile. 69 129 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1614 Lele-ChrLele05 10448965 10450546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1614 1 268 Homeobox Transcription Factor Family AT3G01220 50.690 3.93e-80 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele05g1614 Homeodomain 5.8e-16 CL0123