Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1606 ATGATTAAAAGTGAAAGGCGCAAAAGGAGCCTACTCATGGCAGAAGATCAGTTCCAAGGAACTCGTTATGTCAAGAGACGGCGAAGAGAGCCTTACGCAGCTGCACTTAATAGCAGTGATCAGGTGCAACAGCAGCTGCAGCTACAGCTACAGGGTGATCAAAATTTAACTACTAGTACTATGAAAAGAAGTTCAAGATTTCGTGGTGTAAGCAGACATCGATGGACTGGTCGATTTGAAGCTCACCTGTGGGACAAGCTCTCTTGGAACGTAACACAGAAGAAGAAAGGGAAGCAAGGGGCTTACGATGAAGAGGAATCAGCAGCAAGAGCGTATGATTTAGCTGCACTGAAGTACTGGGGAACATCAACTTTCACTAATTTTCCGATATCAGATTACCAGCAAGAGATAGAGATAATGGAGACCATGACCAAAGAGGAGTACTTGGCTACTTTAAGAAGAAAGAGCAGTGGCTTCTCAAGAGGTGTATCTAAGTACAGAGGCGTTGCAAGGCACCACCATAACGGTAGATGGGAGGCAAGGATAGGAAGAGTGTTTGGAAACAAATACCTCTACCTTGGCACTTATAGCACCCAAGAGGAAGCCGCTCGTGCTTATGACATAGCAGCCATTGAGTATAGGGGGATCCATGCTGTGACAAACTTTGATTTGAGTACTTACATAAGATGGTTGAAGCCTACAAGAGAAAGCATCCAAGAAGCAATACCTGAATCCCAGGTGGTAGCAGAGGCTCAGGCAGAGACAACATCACCATCTATCTACACTCCAAAAGAGGAGAAGAAATTCATGACCCTTCACAGTAGTTCTTTCACAGCTTACCTGAACTCTCCTTGTACGCAAGATTTACTTGAAAGCAAAACCCCTTTAATCTCGAGCAATAAGGCATCTTCTCCTACTGCCCTTGGTCTTCTTTTTCGATCTTCAATATTCAGAGAACTAGTCAAAAAGAACCCAAACATATCTGGAGATGAGACTGAAGGAGAAGACTCAAGGTCAATGGATTTACAGCAGCTGACTGGTGATGGTGAGATAGGTGGGATCTTCTACGATGTAATTGGCAATGATGTACCGTTTGTCTGCGATACCAGCAGGTACAACTCAGGATTGCAAGAAAGAGAGTTTCAGTCCCTTCTATGA 1158 0.4421 MIKSERRKRSLLMAEDQFQGTRYVKRRRREPYAAALNSSDQVQQQLQLQLQGDQNLTTSTMKRSSRFRGVSRHRWTGRFEAHLWDKLSWNVTQKKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYQQEIEIMETMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFDLSTYIRWLKPTRESIQEAIPESQVVAEAQAETTSPSIYTPKEEKKFMTLHSSSFTAYLNSPCTQDLLESKTPLISSNKASSPTALGLLFRSSIFRELVKKNPNISGDETEGEDSRSMDLQQLTGDGEIGGIFYDVIGNDVPFVCDTSRYNSGLQEREFQSLL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1606 385 ProSiteProfiles AP2/ERF domain profile. 165 223 IPR001471 GO:0003700|GO:0006355
Lele05g1606 385 SUPERFAMILY DNA-binding domain 65 131 IPR016177 GO:0003677
Lele05g1606 385 CDD AP2 65 131 IPR001471 GO:0003700|GO:0006355
Lele05g1606 385 CDD AP2 164 225 IPR001471 GO:0003700|GO:0006355
Lele05g1606 385 Gene3D AP2/ERF domain 164 225 IPR036955 GO:0003700|GO:0006355
Lele05g1606 385 Gene3D AP2/ERF domain 65 131 IPR036955 GO:0003700|GO:0006355
Lele05g1606 385 SMART rav1_2 66 135 IPR001471 GO:0003700|GO:0006355
Lele05g1606 385 SMART rav1_2 165 229 IPR001471 GO:0003700|GO:0006355
Lele05g1606 385 SUPERFAMILY DNA-binding domain 164 225 IPR016177 GO:0003677
Lele05g1606 385 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 44 284 - -
Lele05g1606 385 Pfam AP2 domain 65 121 IPR001471 GO:0003700|GO:0006355
Lele05g1606 385 Pfam AP2 domain 164 215 IPR001471 GO:0003700|GO:0006355
Lele05g1606 385 ProSiteProfiles AP2/ERF domain profile. 66 129 IPR001471 GO:0003700|GO:0006355
Lele05g1606 385 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Lele05g1606 385 PRINTS Ethylene responsive element binding protein signature 205 225 IPR001471 GO:0003700|GO:0006355
Lele05g1606 385 FunFam AP2-like ethylene-responsive transcription factor 164 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1606 Lele-ChrLele05 10394687 10396536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1606 62 263 AP2-EREBP Transcription Factor Family AT5G57390 58.019 8.74e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele05g1606 AP2 1.9e-09 CL0081