Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele05g1605 | ATGCCGAGGGCAAGATATGGATTCGTTCACGTGGTGAACAACGACTATAATCACTGGATCATGTACGCTATAGGTGGAAGCTCAGCGCCGACGATACTGTGTCAGGGGAACCGATTCATTGCTCCTAACGACAGAGCAGCTAAGGAGATAACGCACAGGGAGTACGCGACGCCGCAGCAATGGAGCTCGTGGAAGTGGACATCAGATGGACTTGTTCATGAACGGAGCGATGTTTCTTCAGTCGGGAGGGCACGTAACGGCACAGTCATACGCAAGAAACGCCATGATCAAACCCAGAGATGGATCTGCGGTGACGAGGCTGACCAGATTCACTGGTGCTCTGGGTTGCCGAGTGGGAAAGCCTTGCTAGACAATAATTCATGTAAGTGA | 390 | 0.5179 | MPRARYGFVHVVNNDYNHWIMYAIGGSSAPTILCQGNRFIAPNDRAAKEITHREYATPQQWSSWKWTSDGLVHERSDVSSVGRARNGTVIRKKRHDQTQRWICGDEADQIHWCSGLPSGKALLDNNSCK | 129 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele05g1605 | 129 | PANTHER | PECTATE LYASE 18-RELATED | 1 | 82 | IPR045032 | GO:0030570 | |
| Lele05g1605 | 129 | Gene3D | - | 1 | 103 | IPR012334 | - | |
| Lele05g1605 | 129 | SUPERFAMILY | Pectin lyase-like | 1 | 70 | IPR011050 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele05g1605 | Lele-ChrLele05 | 10390342 | 10391206 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele05g1605 | 1 | 70 | Polysaccharide Lyase | AT1G14420 | 64.286 | 3.89e-27 | 102 |