Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1596 ATGGGATTTGGGAATAATGCAATTCAAGCTGGAAGTTTGGACGTGGGCAATTCAAATGGAAGGAAGAAGAAAGATGGTGCAGAGAAGCATAGTAGGTGTTGGGCTAAATTCAGTTGCATCGGGAGCTGCATACCTTCTAGATCAAAGATCGATAACTCCTTAAGTGGTGGTCCTAGCGCCTCCCATAATGTGGAAAACAGATGTACAAATGAAAATACCAAAGATCGACCAGTTGCTCCTCCAGAGTCCTCCACTACCACTAGTAATGCAGGAAGTGTACCCTCAACTCCAAAATTCAGTGAGGAGTTGAAGGTGTCTTCTCGTTTGAGAAAATTCACATTCAATGAACTTAAATTGGCAACTAGGAATTTCAGACCAGAGAGTCTTCTTGGCGAAGGAGGATTTGGTTGTGTCTTCAAGGGTTGGATTGAAGAGAACGGAACTGCACCTGTCAAACCGGGTACTGGGCTTACTGTTGCAGTGAAGACCCTCAACCATGATGGACTTCAGGGTCACAAAGAGTGGCTTGCTGAGTTGAATTACCTTGGTGATCTTGCCCACACTAATCTGGTTAAATTGATTGGCTTCTGTATTGAAGATGACCAAAGATTACTGGTTTATGAATTTATGCCCCGAGGAAGTTTGGAGAACCATCTCTTTAGAAAAGGGCCCTTGCCTCTTCCTTGGTCTGTCAGAATGAAAATTGCTCTTGGAGCTGCGAAAGGTCTTGCCTTTCTTCATGAAGAAGCTCAGAGGCCCGTAATATATCGAGATTTCAAGACATCTAATATCCTATTAGATGCGGAATACAATGCCAAGCTTTCTGATTTTGGACTTGCCAAAGATGGTCCTGAGGTTGGAAAGACCCATGTATCAACAAGAGTTATGGGAACATACGGTTATGCAGCTCCAGAGTATGTGATGACTGGACATTTGACATCAAAAAGTGATGTTTATAGTTTCGGGGTAGTGCTCCTTGAAATGCTTACCGGTCGGCGAGCAATTGATAAAAATAGACCAAATGGGGAACACAACCTGGTGGAATGGGCAAGACCTGCACTGGGAGACCGGAGGATGTTCTACCGGATAATCGACCCTCGCCTTGAAGGTCACTTCTCGATTAAAGGTTCACAGAAAGCTGCCCAACTGGCTGCTCGATGCCTTAGCCGCGATCCAAAATCTAGACCAATGATGAGTGAAGTTGTTCAAGTTCTTAAGCCTTTGCCACACCTTAAGGACATGGCTATTTCATCCCAATACTTCCAGTTCACACGAGTAGATCGCACCATGTCCATGCCAAATCCCAAAAATGGTTCAAAAACGCAGCTAACATCTGTATCAAGGAAAGGTCAACCTGTAAGGATCTTGTCGAGTCCAAACGGTCCACGTGGGTCTCCATATCATTATTATTCCAAGTCACCAAAACCTAATGGGTGA 1437 0.444 MGFGNNAIQAGSLDVGNSNGRKKKDGAEKHSRCWAKFSCIGSCIPSRSKIDNSLSGGPSASHNVENRCTNENTKDRPVAPPESSTTTSNAGSVPSTPKFSEELKVSSRLRKFTFNELKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAELNYLGDLAHTNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRKGPLPLPWSVRMKIALGAAKGLAFLHEEAQRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEVGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRAIDKNRPNGEHNLVEWARPALGDRRMFYRIIDPRLEGHFSIKGSQKAAQLAARCLSRDPKSRPMMSEVVQVLKPLPHLKDMAISSQYFQFTRVDRTMSMPNPKNGSKTQLTSVSRKGQPVRILSSPNGPRGSPYHYYSKSPKPNG 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1596 478 SUPERFAMILY Protein kinase-like (PK-like) 98 405 IPR011009 -
Lele05g1596 478 Gene3D Phosphorylase Kinase; domain 1 98 209 - -
Lele05g1596 478 MobiDBLite consensus disorder prediction 429 454 - -
Lele05g1596 478 FunFam Probable serine/threonine-protein kinase PBL8 210 425 - -
Lele05g1596 478 Gene3D Transferase(Phosphotransferase) domain 1 210 426 - -
Lele05g1596 478 ProSitePatterns Protein kinases ATP-binding region signature. 130 162 IPR017441 GO:0005524
Lele05g1596 478 PANTHER OS01G0588500 PROTEIN-RELATED 83 408 - -
Lele05g1596 478 MobiDBLite consensus disorder prediction 51 67 - -
Lele05g1596 478 MobiDBLite consensus disorder prediction 76 100 - -
Lele05g1596 478 MobiDBLite consensus disorder prediction 51 100 - -
Lele05g1596 478 CDD STKc_IRAK 130 408 - -
Lele05g1596 478 ProSiteProfiles Protein kinase domain profile. 124 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1596 478 Pfam Protein kinase domain 127 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1596 478 MobiDBLite consensus disorder prediction 1 27 - -
Lele05g1596 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Lele05g1596 478 MobiDBLite consensus disorder prediction 429 478 - -
Lele05g1596 478 FunFam Serine/threonine-protein kinase BIK1 91 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1596 Lele-ChrLele05 10339346 10343524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1596 110 421 Glycoside Hydrolase AT3G07070 55.414 1.79e-114 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele05g1596 Pkinase 1.5e-46 CL0016