Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1585 ATGGATTCTAGATACGTTCTTGCAATTTTGTTCTGTTTTCTCCCTGATCTCTGTGTTTCATCCATTAGATCTCTGGCCTTGGGCCTAGATGAGACCACGCATGGATCGGTGCTTGGATTGAACAGGGGCAGCTCATCAGTGAAATTGGATCCTACTCGGGTTACTCAACTCTCCTGGCGTCCAAGGGCTTTTATATACAAGAAATTTTTATCCGACGAAGAGTGTGACCATCTGATCAATCTGGCCAAGGACAAGCTAGAGATCTCTATGGTAGCGGATAATGAATCGGGCAAAAGTGTAATGAGTGAAGTCAGAACGAGCTCTGGGATGTTTCTTGCCAAGGCTCAGGATGAAATAGTTGCTGGTATTGAAGCCAGAATTGCCGCATGGACCTTCCTTCCAATAGAGAATGGTGAATCTATTCAAATATTGCACTATGAGAATGGTCAGAAGTATGAGCCACATTTCGATTACTTCCATGACAAGGCTAATCAGCAACTGGGAGGCCATCGGATTGCCACCGTGCTGATGTATTTGTCTAATGTTGAGAAAGGTGGTGAGACTGTTTTTCCCAATTCTGAGGGAAGATTATCCCAGATAAAGGATGATAACTGGTCTGAATGCGCAAAGAAAGGCTACGCAGTGAAACCAGATAAGGGGGATGCACTGCTGTTCTTTAGTCTACATCTTGATGCAACCACAGACCCTTTGAGTTTGCACGGAAGCTGCCCGGTGATTGAGGGTGAGAAGTGGTCTGCAACCAAGTGGATTCACGTGAGAGATTTCGACAAGCCAATCACAAGAAGAAACGATGGTGAATGTGTGGATGAGAACGTAAATTGCTCCAAATGGGCTAAAGTAGGGGAATGCGACAAGAACCCACTTTATATGGTTGGGAATGAGGAAGTCAAAGGATTCTGTATGAAGAGCTGCAATGGCCTTTGGACTCCTGAGGAGGATGCTAAAGTACTCGCTTATGTCTCCAATCATGTCACTGGAAATTGGACTCTGGTTCCTAAGAAAGCTGGGTTAAACAGATATGGAAGCAGGGGGTCATCGATTGCAAGGAGATTCCCTGGGAGAACGGACAATGATGTGAAGAACCACTGGAACATAAAACTGAGGAAGAAGCTTATGAAGATGGGAATTGAGCCAGTGACCCATAAGCCTGTGTCTCATCAAGTCCTTTTTGATTTGGGAACTATTAGTAATTCCCTCTCAACTGTAACAACTGAAACGCAATCTCCAAACAACAACTTAATGGTCTCTAATAATCAACTAGATCAAGAGGTGCAATCCCAATTCATTATTGACCCAGCTGAGAATAACGTCCAGTCACACCACAATAATAATGAAGCTGCTGCGTCTTCATGTTCATCATCGTCGTCATCTTCTTCCTCTAGTATCACACAACTTATATGCTCACCTCCTCCTCAGGGCTATTACAACTACTGCTGCTACTGCTGCAGTTTTATGATGCAGAACCAAATTCAAGTCTCGAATAATGCCAGTGATGAGGATTCGGGGCTTGTGGCTTATGAGGAAAGCATGAAGAAGCGCCAAGTTTAATCTCAAGACACATCGACCAGGAAGGGAAATGGATCGCGACTTAAAAACGAGAACACTAAACAAGAAACGTTAGCAGATAATGAAAGTAACGTGTCAAGTCCTCAAAGCACGTCATCGTCTTCGCCGTCGTCTCCGTCTTCATCTCCGTTTGAAGATAAGATGCACAACATGTCGTTCATGGGGAGGTTTCCATATGGATTAAGAAACCTCATAATGTATGAGTACTTTGATGCGTCAATGAATACTCAGGGAGGTAATCTTTCTAGATTGAGGTTCTTGAATAATCTCAATTCTCTGGGTTGGGTTCATGCGTATCCCTCAGCGGCATCAACTTATCGCAAAATTCACTATCGGAAAAAATGCCTTCTTCTCTGGGGGATAATATTCAGTCATCTGTATTCCTTATACGAAAACTCCGCACCTTCTTAA 1998 0.4369 MDSRYVLAILFCFLPDLCVSSIRSLALGLDETTHGSVLGLNRGSSSVKLDPTRVTQLSWRPRAFIYKKFLSDEECDHLINLAKDKLEISMVADNESGKSVMSEVRTSSGMFLAKAQDEIVAGIEARIAAWTFLPIENGESIQILHYENGQKYEPHFDYFHDKANQQLGGHRIATVLMYLSNVEKGGETVFPNSEGRLSQIKDDNWSECAKKGYAVKPDKGDALLFFSLHLDATTDPLSLHGSCPVIEGEKWSATKWIHVRDFDKPITRRNDGECVDENVNCSKWAKVGECDKNPLYMVGNEEVKGFCMKSCNGLWTPEEDAKVLAYVSNHVTGNWTLVPKKAGLNRYGSRGSSIARRFPGRTDNDVKNHWNIKLRKKLMKMGIEPVTHKPVSHQVLFDLGTISNSLSTVTTETQSPNNNLMVSNNQLDQEVQSQFIIDPAENNVQSHHNNNEAAASSCSSSSSSSSSSITQLICSPPPQGYYNYCCYCCSFMMQNQIQVSNNASDEDSGLVAYEESMKKRQVXSQDTSTRKGNGSRLKNENTKQETLADNESNVSSPQSTSSSSPSSPSSSPFEDKMHNMSFMGRFPYGLRNLIMYEYFDASMNTQGGNLSRLRFLNNLNSLGWVHAYPSAASTYRKIHYRKKCLLLWGIIFSHLYSLYENSAPS 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1585 665 MobiDBLite consensus disorder prediction 511 525 - -
Lele05g1585 665 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 313 378 IPR017930 -
Lele05g1585 665 CDD SANT 315 371 IPR001005 -
Lele05g1585 665 SUPERFAMILY Homeodomain-like 311 370 IPR009057 -
Lele05g1585 665 ProSiteProfiles Myb-like domain profile. 313 374 IPR001005 -
Lele05g1585 665 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 50 260 IPR045054 -
Lele05g1585 665 Pfam 2OG-Fe(II) oxygenase superfamily 142 258 IPR044862 -
Lele05g1585 665 ProSiteProfiles ShKT domain profile. 274 315 IPR003582 -
Lele05g1585 665 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 137 259 IPR005123 -
Lele05g1585 665 MobiDBLite consensus disorder prediction 510 576 - -
Lele05g1585 665 Gene3D - 312 380 - -
Lele05g1585 665 MobiDBLite consensus disorder prediction 546 576 - -
Lele05g1585 665 Gene3D q2cbj1_9rhob like domain 53 259 - -
Lele05g1585 665 FunFam Prolyl 4-hydroxylase 4 53 259 - -
Lele05g1585 665 MobiDBLite consensus disorder prediction 431 461 - -
Lele05g1585 665 SMART sant 311 376 IPR001005 -
Lele05g1585 665 SMART p4hc 61 258 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1585 Lele-ChrLele05 10191131 10198264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1585 313 425 MYB Transcription Factor Family AT3G28470 48.993 8.49e-28 112