Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1583 ATGATGAGCAAAGCTTCACTGGATCTCAGGAATTGCCTTCTGCTGCTATTGTGCAGCTCCGTGGGCTTATGGGGTTTTACTGCATCGGAGGTTGAAGATGACGTGAAATGCCTCAAGGGCATCCAAGATTCGTTCGGGGGTCCTGATGGGAAGCTTTCAACGTGGCAATTCAACAACAACACACCCGGCTTCATTTGCCGATTCAACGGCGTTACGTGCTGGAATGACCAGCAGAATCGCATCATCAGTCTGGGGCTCAATACTATGGAGCTCTCCGGTCGCGTGCCGGAGTCCTTGAAGTACTGTGGTAATCTGCAGCGACTGGATCTTGGGTCCAACGACCTTTATGGTGAGATCCCCAATGAGCTTTGTGTTTGGATGAAGTATTTAGTGAGCCTTGACTTGTCGGTTAATCGTCTTTCTGGACCTATTCCCCCTTCTCTCGGGAATTGCTCGTATTTGAATGAGTTAAGCCTTTCCAGTAATCAGCTTTCAGGTGTCATCCCTGTCGAAATTGGGAGCTTGACTAGGCTTAGAAAGTTTTCTGTTGCTAATAATCGTCTTGAGGGAGCGATTCCTTCGTCTTTAAGTTGGTTTGACAAGGAAAACTTCGAGACGAATAGTGGGCTTTGTGGGGATCCTCTTGGATCTAAGTGTGGAGGGCTGAGTAAGAAGAATCTTGCCATTATCATAGCTGCTGGGGTGTTTGGTGCAGCTGCTTCTTTGTTACTGGCTTTTGGGCTTTGGTGGTGGTACCATTTGAGATTGAGTAAGAAGGGGTTAGGAGACAGAGCAAGTGATAATTGGGCTGTGAGATTGAGGGGTTACAAGCTTGTGCAGGTCACTCTATTTCAAAAACCCCTTGTGAAGGTTAAACTAGGCGATTTGATGGCGGCTACCAATAATTTCAGCGGAGAAAACATTCTTATTTCAACAAGAACAGGAAATACTTACAAAGCAGATCTTCCTGATGGGTCAACCCTTGCAGTCAAACGGCTCAATACATGTAAAATCTTGGAGAAGCTCTTTCGCGTTGAGATGAATAGGCTAGGCCAACTCAGGCACCCGAATTTGGCACCGCTTTTGGGATTCTGTGTAGTGGAAGAGGAAAAGTTTCTGGTTTACAAATACATGTCAAATGGAACTCTCTTCTCCTTGTTGCACAAAAACGGCGATGCACTGGACTGGCCCACGAGATTCAGAATAGGCTTGGGGGCAGCTAGGGGTCTTGCTTGGCTGCATCATGGGTGCCATCCCCCTATTATACACCAAAATATCTGTTCCAATGTGATTCTTGTTGATGAAGATTTTGATGCTCGTTTAATGGACTCTGGACTTGCCCGGCTTATAACATCTGACTCTGAAGGGACTAGTTTTGTGAATGGAGACTTGGGGGAACTTGGCTATATAGCTCCAGAATATTCTAGCACTCTGGTTCCTTCACTAAAAGGAGATGTTTATGGATTTGGGGTTGTGCTTTTGGAGTTGGTCACTGGGCAGAAACCTCTTGAAGTCAGCATTGGAGAGGAAGAAGTTAAGGGTAATTTAGTGAATTGGGTGAATACGCTTTCTAATTCTGATCGCATCAAGGATTGCACTGACAAGGCCATAAGTGGAAAGGGACACGATGAGGAGATTTTGCAGTTTCTGAGAATTGCATGTAATTGTGTGGTTTCTCATACTAAGGATAGGTTGTCTATGTACCAGGTTTATCATTCGTTGAAGAGTCTATCTAAGGACCAAAGTTTTTCGGAGCATGATGATGAATTTCCACTTATATTCGGGAAGCCTAATGATGAATCAGCTTAG 1809 0.4516 MMSKASLDLRNCLLLLLCSSVGLWGFTASEVEDDVKCLKGIQDSFGGPDGKLSTWQFNNNTPGFICRFNGVTCWNDQQNRIISLGLNTMELSGRVPESLKYCGNLQRLDLGSNDLYGEIPNELCVWMKYLVSLDLSVNRLSGPIPPSLGNCSYLNELSLSSNQLSGVIPVEIGSLTRLRKFSVANNRLEGAIPSSLSWFDKENFETNSGLCGDPLGSKCGGLSKKNLAIIIAAGVFGAAASLLLAFGLWWWYHLRLSKKGLGDRASDNWAVRLRGYKLVQVTLFQKPLVKVKLGDLMAATNNFSGENILISTRTGNTYKADLPDGSTLAVKRLNTCKILEKLFRVEMNRLGQLRHPNLAPLLGFCVVEEEKFLVYKYMSNGTLFSLLHKNGDALDWPTRFRIGLGAARGLAWLHHGCHPPIIHQNICSNVILVDEDFDARLMDSGLARLITSDSEGTSFVNGDLGELGYIAPEYSSTLVPSLKGDVYGFGVVLLELVTGQKPLEVSIGEEEVKGNLVNWVNTLSNSDRIKDCTDKAISGKGHDEEILQFLRIACNCVVSHTKDRLSMYQVYHSLKSLSKDQSFSEHDDEFPLIFGKPNDESA 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1583 602 Pfam Leucine Rich Repeat 104 124 IPR001611 GO:0005515
Lele05g1583 602 SUPERFAMILY Protein kinase-like (PK-like) 281 574 IPR011009 -
Lele05g1583 602 Gene3D Ribonuclease Inhibitor 31 221 IPR032675 -
Lele05g1583 602 Pfam Leucine rich repeat N-terminal domain 32 74 IPR013210 -
Lele05g1583 602 SUPERFAMILY L domain-like 31 201 - -
Lele05g1583 602 Pfam Protein tyrosine and serine/threonine kinase 324 532 IPR001245 GO:0004672|GO:0006468
Lele05g1583 602 Gene3D Phosphorylase Kinase; domain 1 263 377 - -
Lele05g1583 602 Gene3D Transferase(Phosphotransferase) domain 1 378 597 - -
Lele05g1583 602 Coils Coil 599 602 - -
Lele05g1583 602 FunFam Nuclear pore complex protein NUP107 31 194 - -
Lele05g1583 602 Pfam Leucine rich repeat 130 188 IPR001611 GO:0005515
Lele05g1583 602 ProSiteProfiles Protein kinase domain profile. 303 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1583 602 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 264 377 - -
Lele05g1583 602 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 79 576 - -
Lele05g1583 602 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 378 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1583 Lele-ChrLele05 10177104 10178912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1583 13 600 Receptor kinase-like Gene Family AT3G28450 62.248 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lele05g1583 PK_Tyr_Ser-Thr 2.5e-28 CL0016