Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1568 ATGCAAGCTCTTGAGGGTCAAGTAAATGATCAAAGAGGAAATACATCTGGAATTGCATCAATTATTAGGAAATTCACAGAGCCAATTCGTAAAGACGGTGGCATATACTCCCATGAGAAACCAAATAGTGAATTTTTGCCTCTTCTGCATAAGGATCTGTTTTCATCTGGATTACGTAAGCGGTCTGGTGTTCTTCTGTATGGTCCCCCAGGAACTAGCAAAACATTATTGGCCAAAGCTGTTGCCACCGAATGTTCCTTAAATTTTCTTTGTGTAAAAGGGCCTGAACTGATAAACATGTACATTGGAGAGTCTGAGAAGAATGCGCGAGACATTTTCCAGGAGCCTAGATCAACACGACCACGTGTTATCTTCTTCGATGAGCTTGGTTCTCTTGCTCCAGCTCGGGGGCCCTCCAGGGATTCTGGGGGTGTTATGGACAGAGTGGTTTCTCAGATGCTGGCGGAGATCGATGACCTGAATTATTCTGCAGGTTCAAGTAACAGGCCGGACTTGATAGACCCTGCACTTCTACGCCCAGGCAGATTTGATAAACTGCTGTATGTTGGAGTTAACTCTGATGCATCTTACAGAGGGAGGGTCCTTAAAGCACCTACCGGAAAGTTTAGATTGTCTGAAGACGTATCACTTTACTCAATAGCTAAAAGGTGTCAACCAAACTATACTGGTGCAGGCATGTATGCCTTATGTGCAGATGCATGGTTTCAGGCAGCAAAACGCAAGGTTGCAAGTGAAGATCCAGAGTCGTCCTGTAAAGATGATGAAGCAGACTCTGTTGTTGAATACAGTGATTTTGTCCAGGTATTGGTGGAGCTGACGCCTTCTCTGTCCATGGCTGAGTTTAAAAAGTTTGAAGCGCAACTCCAGAGTCCTGAGGCATATTCTAGCCCACTAGCTTTGGAATTGGAAGGGTAA 936 0.4476 MQALEGQVNDQRGNTSGIASIIRKFTEPIRKDGGIYSHEKPNSEFLPLLHKDLFSSGLRKRSGVLLYGPPGTSKTLLAKAVATECSLNFLCVKGPELINMYIGESEKNARDIFQEPRSTRPRVIFFDELGSLAPARGPSRDSGGVMDRVVSQMLAEIDDLNYSAGSSNRPDLIDPALLRPGRFDKLLYVGVNSDASYRGRVLKAPTGKFRLSEDVSLYSIAKRCQPNYTGAGMYALCADAWFQAAKRKVASEDPESSCKDDEADSVVEYSDFVQVLVELTPSLSMAEFKKFEAQLQSPEAYSSPLALELEG 311
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1568 311 Gene3D - 192 277 - -
Lele05g1568 311 SMART AAA_5 60 194 IPR003593 -
Lele05g1568 311 FunFam ATPase family, AAA domain-containing 2B 33 191 - -
Lele05g1568 311 PANTHER AAA-FAMILY ATPASE 46 294 - -
Lele05g1568 311 Pfam ATPase family associated with various cellular activities (AAA) 64 190 IPR003959 GO:0005524|GO:0016887
Lele05g1568 311 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 285 IPR027417 -
Lele05g1568 311 CDD AAA 58 190 - -
Lele05g1568 311 Gene3D - 46 292 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele05g1568 Lele-ChrLele05 10052686 10055919 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1568 57 263 Calmodulin-binding Proteins AT3G56690 36.279 1.16e-33 129