Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1551 ATGACGAAGGACCAACCCCCACACTGGTGGTGGCTAAACAATCGCAGCACCATTAGACAATCACCTTGGCTCCAATCCACTCTTGCTGAGCTGAATGAAAAGACCAAGACAATATTAGAACTAATAGAGGAAGATGCAAATTCTTTTGCTCAACGTGCTGAAATGTATTACAAGAAGCGACCCGAGCTTATCCGGATGGTCGAAGATTTCTATCGGACACAGCGTTCATTAGCTGAGAACTATGACCAAGTCAAATCTGACACTGGAATTCGACTCCTCACGACCGGGGCATCTCCATTTCCTCCAACCAAGTATCAATCAGACAACAACGTAATGGGTTTTAAGGAAAGAAGTTATGATAGCTATTCTGATAATTGTGATGCTGAGGAACCTGTGGAGTCTGAATTTGATGATTCGGAGATGAAATTAACTACCAAATTTGCTGAAGATGATGATGAACTGATGAGGTTGGGGGAAGAAATTGTGAGACTCAGGGAAGAGAACAGGGCTTACAAGGATCAACTCAACCAGAAAGATGCCATAAATGATGAAATAATGATCTTGAATGAACTAGTAGGAGGACTCAGAGAAGAGAACAGAGCTTATAAGGATCAACTGAAGCGGAAAGATGCCTTGTGTAATGAAGTAACGATATTGAGAGAAGACATAAAAAGATTCAGAGAAGAGAACAGAGAACAGAGGGATCAACTCAAGGAGAAAGATGAAGAGAAAATAAAGGTAATAAGACATCTGAGCATAGCAATAGATTTTCTGAGAGAGGAGAATGCGAAGATGAGAATCTATATTGCCAAGGACTACAAGAAGTGGAAGAACCCATTTGAGTTCAACAAACTCAAGAGAGCCTTATCATGGAACTTGTTTAATGGTCAAAGGAACCCTAGTACCGTAACTTCCTAG 918 0.4096 MTKDQPPHWWWLNNRSTIRQSPWLQSTLAELNEKTKTILELIEEDANSFAQRAEMYYKKRPELIRMVEDFYRTQRSLAENYDQVKSDTGIRLLTTGASPFPPTKYQSDNNVMGFKERSYDSYSDNCDAEEPVESEFDDSEMKLTTKFAEDDDELMRLGEEIVRLREENRAYKDQLNQKDAINDEIMILNELVGGLREENRAYKDQLKRKDALCNEVTILREDIKRFREENREQRDQLKEKDEEKIKVIRHLSIAIDFLREENAKMRIYIAKDYKKWKNPFEFNKLKRALSWNLFNGQRNPSTVTS 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1551 305 PANTHER PROTEIN NETWORKED 4A 8 140 - -
Lele05g1551 305 Coils Coil 209 243 - -
Lele05g1551 305 Pfam KIP1-like protein 9 82 IPR011684 GO:0003779
Lele05g1551 305 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 7 88 IPR011684 GO:0003779
Lele05g1551 305 Coils Coil 147 184 - -
Lele05g1551 305 Coils Coil 24 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1551 Lele-ChrLele05 9943537 9944980 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1551 05 9943537 9944980 Lele13g2034 13 27544148 27546293 CCT
Lele05g1551 05 9943537 9944980 Lele14g1967 14 25887534 25889247 CCT
Lele05g1551 05 9943537 9944980 Lele15g0371 15 2123968 2130377 CCT
Lele05g1551 05 9943537 9944980 Lele16g0391 16 2143167 2144962 CCT
Lele05g1551 05 9943537 9944980 Lele05g1551 05 9943537 9944980 ECH
Lele05g1551 05 9943537 9944980 Lele07g1607 07 9944498 9945946 hybridization
Lele05g1551 05 9943537 9944980 Lele08g1396 08 8941368 8942759 hybridization