Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1547 ATGGTGGTGAGGATCGTTGGGGGTAGGAATCTGAAACTGGGTGCGCACCAGAGGAGGATGAACGGTGTAGCTGCTGCGAACAAAGGATCTCCAGCTAATGACTCCGCAAAGAATGGCGACAAAGCTCCAACATTTAACTACGGCGGCCTCTCCCTGGAAGGTGAGAAAGATGTTTTGAATGATTCACTGTGGAAAGCATGCGCCGGCTCTTCTGTCATTGTTCCTCGCACTGGCGACTTGGTCTTCTATTTTCCTCAAGGCCACTTGGAACAGGTGGCTGACTTTACTCGGCAAGATGGTCACATGGAACTTCCTGCTTGTGATTTGCCTTCTCAAATCCTTTGCAGGATCATGGGTGTTCAACTAAAGGCTGAAGCCAACACAGACGAGGTTTTTGCTCAAATTACTTTAATCCCTGAGTCAAAGGTTGCAGCTATCTTTGTTCTGGATGAAGTTAGTTCAGATGATAAAGGGTCTCGGCTAAAACCCAGAACTACTTCCAGGTGCTTTAGTAAGACGCTCACCCTATCAGATACAGGATATGTCTCAGCAACCACCAGGACAAGAGCTCGTTGCAAAGGACTTGCATGGTGTTATATGGAATTTTCGCCATACCTATCGGGGACCACTTCCACTTTTTCTTTTGAAAATATGCTCTTTCGGATACTCATACGAGCTATCTTTACTTTGGAGCTTGATATCTATAAAACTGATTGCAGCGGAGAAAATGGAGAACTTGGTATTGGAATCCGTCGAGCACTTAAACACCACAACAAAGCATCCTCATCCACATGCGTGATATCTGGCCATAGCATGCAACTGGGGATATTGGCCACCGCTTCTTATGCTGTTGCTACTGGATCCATGTTTACTGTCTACTACCGTCCTTGTTTTCCAAATTTATGTCGAAGGACTCGTATACTTTGCAGGACTTGTCCCTCTGAATTCATTGTTCCATTGGGTCACTACATGAAGTCAAATAAAGTGAAATATTCATGTGGAATGAGGATACAAATGCAGTTTGAAGTCGAAGAATCTACAAGGAGATATGCAGGAACAATAACAGGTATTGACGATATTGATGGCATGAAATGGCCTGGTTCAGAATGGAGATGTCTCAAGGTGAAATGGGACGCCAAGCTTGATACAGATATGCGTCCTGAAACGGTTTGTCCTTGGAACATTGAGCCCTTGGAATCTTCCGGGAAGAACATTCCTAATCTAGCCCCACCAAAGAGGCCACGTCTACTTGGCCCATCAATGTCTGGATTATTCGATCTTAGCAAGGATGACATCGAACTGAACTCAGCCAACAATGCATCTCAGAGATGTGAAAGGGACTTACAAGGTCAAGATTACAAAGATGTAGGCTTCCAACAATATGACTCACAGTTTAGGACGAAGAATCTGCCACACTTGCAACTGCAAATCCCTCCGTGCCAATCTCTTGGCAGCTCAGCATCCTTTCCAGATGATGACGTTTCAACTTCAAGCCCCCTCAAACAGGCCCCAATCCCAACCACTTATGACGCATGTCATAATGTCCCCGTCACCAGGTACCTTTCACTCTCAAATGTGAATCCCAATGATTCTGAGTCCCAGGGATGGCGGGCGTCGGAATCGAGGGATGAGAATGATAGCAAAACTGAATACAAGCTTTTCGGGATAAGCTTAAACCCCCCGGAGCTCCCTTCACCACAAGTTGCTGCTTCTAGCATTACTTCAACCCTTCATGTTCCTCCAATGTCTCGGTCAAGCGTTTCTGCGACTATCCCAGTTTCCAAACCATCAAAGGGTATCTCAGGTGTTGCGTCCCAGAAAAAATGCAAGAAATGTAGCCCTGTTAATAGCAGGACTTGCACAAAGGTGCTTAAGCGTGGAAGCGCACTTGGTAGATCAATTGACCTCTCTCGTATTACTGGATACGATGACCTCATTTCTGAATTGGACTTGATGTTTGATTTCAAAGGAAGCTTAATAAATGGAAGCAGCGGATGGCATGTTGTCCCCATGGATGATGATGGGGATATGATGCTTCAACCTATTGAGATGAAATACTTTGGGTTAGTTGATCTTACTACTGGTTTGAATTCTTCGATTAACCCGTGCAGGGATTTCCAGTCCATGGTGCAAAAGATGATCATTTGTCCAAAAGAGGACTCCAACAACCGGAGTGCTATTGCTAGCACAGCAGACTCAACAACCTTTTAA 2211 0.4518 MVVRIVGGRNLKLGAHQRRMNGVAAANKGSPANDSAKNGDKAPTFNYGGLSLEGEKDVLNDSLWKACAGSSVIVPRTGDLVFYFPQGHLEQVADFTRQDGHMELPACDLPSQILCRIMGVQLKAEANTDEVFAQITLIPESKVAAIFVLDEVSSDDKGSRLKPRTTSRCFSKTLTLSDTGYVSATTRTRARCKGLAWCYMEFSPYLSGTTSTFSFENMLFRILIRAIFTLELDIYKTDCSGENGELGIGIRRALKHHNKASSSTCVISGHSMQLGILATASYAVATGSMFTVYYRPCFPNLCRRTRILCRTCPSEFIVPLGHYMKSNKVKYSCGMRIQMQFEVEESTRRYAGTITGIDDIDGMKWPGSEWRCLKVKWDAKLDTDMRPETVCPWNIEPLESSGKNIPNLAPPKRPRLLGPSMSGLFDLSKDDIELNSANNASQRCERDLQGQDYKDVGFQQYDSQFRTKNLPHLQLQIPPCQSLGSSASFPDDDVSTSSPLKQAPIPTTYDACHNVPVTRYLSLSNVNPNDSESQGWRASESRDENDSKTEYKLFGISLNPPELPSPQVAASSITSTLHVPPMSRSSVSATIPVSKPSKGISGVASQKKCKKCSPVNSRTCTKVLKRGSALGRSIDLSRITGYDDLISELDLMFDFKGSLINGSSGWHVVPMDDDGDMMLQPIEMKYFGLVDLTTGLNSSINPCRDFQSMVQKMIICPKEDSNNRSAIASTADSTTF 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1547 736 ProSiteProfiles PB1 domain profile. 618 703 IPR000270 GO:0005515
Lele05g1547 736 FunFam Auxin response factor 330 402 - -
Lele05g1547 736 Gene3D - 330 404 - -
Lele05g1547 736 MobiDBLite consensus disorder prediction 523 544 - -
Lele05g1547 736 Pfam Auxin response factor 280 374 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele05g1547 736 MobiDBLite consensus disorder prediction 481 502 - -
Lele05g1547 736 Gene3D - 614 688 - -
Lele05g1547 736 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 242 722 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1547 Lele-ChrLele05 9912975 9918731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1547 616 720 B3 DNA Binding Superfamily AT5G62000 38.095 2.55e-15 78.2