Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1524 ATGAAGGAGAATGCAGATTCCGCTGTTGGGGTTCTTGAGGACTATTTTAGGAGCTCGGAATCAGACACAAGTTCTTCCAAAGAACCTACCGTAGATTCTGATCAGTCTCAAGATAAGTCAAAATTTGCTTCTAAATGGCGAGGCTTTCTGCAGAATCTGACAAAAGGGTCTAAACCCGTACCCGCAACCATGAATCCTCCTCCTCTCAGTGTCTTCAAGCTGTCTAAGAGAATGAGCAGAAGCATGAGAGAGACAATATTTCCAAGTTCTCGCTTAGGTGCAGATTCCTCTCTCCACAATTCACCATGGCGGATCTTCACTCACAGGGAAATTCTACTTGCAACCACTTCCTTCAGTCAAGAAAACCTCATTGGGAAAGGTGGGTATGCTGAAGTTTACAAAGGGTGTTTGCCAAATGGTCAGCTAGTAGCAATTAAAAAGCTGACACGTGGAACCCAAGATGAGATTATTGGTGACTTCTTATCAGAACTTGGCATAATGGCACACGTTAATCATCCCAATACTGCAAAACTAGTAGGCTATGGCGTTGAAGGAGGCATGCACATTGTTCTTGAATTCTCTGAAAAAGGAAGCTTAGCTTCAGTACTTCACGGTTCTAAGGAAAACCTTCCATGGTGTATTAGGTATAGCATTGCTTTAGGAACAGCCAAGGGTATATTATATCTGCACGAGGGCTGTCAAAAAAGAATCATCCACAGAGATATAAAGGCAGCGAATATCTTACTCACAGAGGATTACGAGCCACAGATTTGTGATTATGGACTAGCAAAATGGCTGCCTGAGAACTGGACCCACCACACCGTTTCAAAATTCGAAGGAACCTTTGGTTATCTTGCCCCAGAGTACCTGCTTCATGGCATAGTAGATGAAAAAACGGATGTATTTGCTTTCGGTGTTCTGCTATTAGAATTAGTTACTGGTAGACGAGCCCTTGATTATTCACAGCAAAGCCTTGTTTTGTGGGCAAAATCATTGTTGAAGAAGAACAGAATCAGGGAGCTGATTGATCCATCACTAGGTGATGCGTTTGATACTCGGCAGATGAATTTTGTACTGTTGGTCGCTTCTTTGTGTATACACCAGTCCTCGATTCGCAGACCCTCCATGAGACAGATGGTGCCGCTTCTGAATGGTAATCTTAGCAGCTTTAAGAGCATGAAGAAAAGTCGATTGCCATTTTTCCGAAAGCTATTTCAGGAAGAGCTCCTTGATTCTGAATAG 1242 0.43 MKENADSAVGVLEDYFRSSESDTSSSKEPTVDSDQSQDKSKFASKWRGFLQNLTKGSKPVPATMNPPPLSVFKLSKRMSRSMRETIFPSSRLGADSSLHNSPWRIFTHREILLATTSFSQENLIGKGGYAEVYKGCLPNGQLVAIKKLTRGTQDEIIGDFLSELGIMAHVNHPNTAKLVGYGVEGGMHIVLEFSEKGSLASVLHGSKENLPWCIRYSIALGTAKGILYLHEGCQKRIIHRDIKAANILLTEDYEPQICDYGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVTGRRALDYSQQSLVLWAKSLLKKNRIRELIDPSLGDAFDTRQMNFVLLVASLCIHQSSIRRPSMRQMVPLLNGNLSSFKSMKKSRLPFFRKLFQEELLDSE 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1524 413 MobiDBLite consensus disorder prediction 17 31 - -
Lele05g1524 413 PANTHER OS08G0249100 PROTEIN 6 409 - -
Lele05g1524 413 MobiDBLite consensus disorder prediction 1 43 - -
Lele05g1524 413 SUPERFAMILY Protein kinase-like (PK-like) 103 400 IPR011009 -
Lele05g1524 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Lele05g1524 413 ProSiteProfiles Protein kinase domain profile. 118 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1524 413 SMART serkin_6 118 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1524 413 Gene3D Transferase(Phosphotransferase) domain 1 195 400 - -
Lele05g1524 413 Gene3D Phosphorylase Kinase; domain 1 81 193 - -
Lele05g1524 413 Pfam Protein kinase domain 119 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1524 413 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Lele05g1524 413 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 89 192 - -
Lele05g1524 413 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 195 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1524 Lele-ChrLele05 9777409 9779422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1524 105 379 Trihelix Transcription Factor Family AT1G68690 40.210 1.33e-65 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele05g1524 Pkinase 1.2e-41 CL0016