Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1523 ATGACTATGACAATCTTCTTCTCTCTTCATCATCTCAAAGTCAAAGCTATCATATTTTTTGCTCTCTCTTCCCCTTTCTTCATCTTCATACTCTGCTTCTTCCTTTTCCTTCTTTCTCACTCTCGCCACCCTCAATCCTCTTCCTCAATGTCCCTCTTCCTCTTCTTCTTTGTTTCCCTCGCTTTCCCACTTTCCTCCCTCTCTGCAAACGACACCGGTCTCAATGCTCCCTGCCCTCTCAACTTCACCGTCCTCAATGTTGTTGCCGGCGGTGACAAACCCTCTCTCGACTCCGGCACTGTCTGCGGGTTCTCCCGCTCCGCCATCCGCCTCGTTCAGTCCGATTACCTCCGTCGCACCGGCTTCTTCCTTCCGCCTCTTAACTCATCTGAGACCTGCTGGGATAATTTACAGAAGTTCATCAATCAATACCTTCCCAACATCGACGTTCGCACCACTTGTGGCTTTCGAACAACCTGGATCTCCCAGGGATGCCAGAACATCACCACTAAATATGATTTCGAGTCCCAGGTTCCTCCCGGGGTTATTCAGGATGTCGATCGGAATTGCAATCAGTCGCTCGAAAATAACTCCCCCTGCGCCCTCTGTACCGCGAGCTTATCGAATATGCAACCATACATGAAAGGAAATTCGACCGGGAACGTCTCCGATTGTACGGCCTACCCCCCAATTTACGCCGCCGCCTTTGCCAATCAGGCTGGTCCCGCCGACAGAGGCACTGCCCAGTGCGTGTTCCTTCTCAGCTTCAAGTCGCCAGGTTCCCACGGTAATAAACGAACGATTGTTATTGTGGCGGTTGTGATTGTCTGTGTATTGGCTTTGTTGCTGGTGATTGCTGGGCTTTGGCTTCACCGGAGATCGGAACAGAAGGGTAAGATGGGTATTAGCAAAACTGAGATTCATGTCGTGTCTGGGTTGGATTCAATGAAGGAGAGTACCACTTTGATTAGGTTTACATTCGATGACATAAAGAAGGCAACGAGGAACTTCTCTAGGGATAACATAGTAGGTAGAGGAGGATATGGAAATGTATATAAAGGGTTACTCCCAGATGGAACTGAAGTTGCATTGAAAAGGTTCAAGAATTGTTCTGCTTCAGGAGATGCAAGTTTCACTCATGAAGTTGAGGTCATTGCAAGCGTCAGGCATGTAAATTTAGTTGCTCTGAGAGGTTATTGTACGGCCACAACTAATTTAGAGGGTCACCAGAGGATTATCGTTTGTGATTTGGTCAAGAATGGGAGTCTTCATGATCATTTATTTGATTCTTCAGGAAAGAAACTCAGCTGGCCAATCCGTCAACAGATTGCACTGGGCACTGCAAGAGGATTAGCTTATTTACACTATGGAGCTCAACCTTCCATTATTCATAGGGATATTAAAGCAAGTAATATCCTCCTGGATGAGAAGTTCGAAGCTAAAGTTGCAGATTTCGGACTCGCTAAGTTCAACCCCGAGGGAATGACTCATATGAGCACTCGTGTAGCTGGAACAATGGGGTATGTTGCACCAGAGTATGCATTGTACGGTCAGTTAACAGAGAGAAGTGATGTGTTCAGTTATGGTGTCGTGCTTCTCGAGCTTTTGAGCGGGAAGAAGGCTCTTCAAATGAACGACGATGGCCAACCCTCATCTTTGAGTGACTTGGCATGGTCATTGGTTAGGGCAGGTAGAGCTTTGGATGTCATTGAAGATGGCATGCCGGAAGCAGGTTCGCCGGAAGTGCTCGAGAAGTATGTGTTGATAGCAGTTCTTTGTTCTCACCCTCAGTTATATGCAAGGCCAACAATGGATCAGGTGGTGAAGATGTTGGAGACTGAGCAATCAGTACCATCAATACCAGAACGGCCAATTCCTCTTGTCGCCGGAAGGATTGATATCGAGAGGTCCGCGGGTAGCTTTGGCGGCTCCGGTCAGCTCTCTAGTCCAACAGGTTATCGAACATTCGCATATGAAAGCGAATGCCATTCTTCTAATTCAAAGGAAGAAGAAGGAAGTTCAGACTCAAGAATACTGAGTACATAA 2046 0.4721 MTMTIFFSLHHLKVKAIIFFALSSPFFIFILCFFLFLLSHSRHPQSSSSMSLFLFFFVSLAFPLSSLSANDTGLNAPCPLNFTVLNVVAGGDKPSLDSGTVCGFSRSAIRLVQSDYLRRTGFFLPPLNSSETCWDNLQKFINQYLPNIDVRTTCGFRTTWISQGCQNITTKYDFESQVPPGVIQDVDRNCNQSLENNSPCALCTASLSNMQPYMKGNSTGNVSDCTAYPPIYAAAFANQAGPADRGTAQCVFLLSFKSPGSHGNKRTIVIVAVVIVCVLALLLVIAGLWLHRRSEQKGKMGISKTEIHVVSGLDSMKESTTLIRFTFDDIKKATRNFSRDNIVGRGGYGNVYKGLLPDGTEVALKRFKNCSASGDASFTHEVEVIASVRHVNLVALRGYCTATTNLEGHQRIIVCDLVKNGSLHDHLFDSSGKKLSWPIRQQIALGTARGLAYLHYGAQPSIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGKKALQMNDDGQPSSLSDLAWSLVRAGRALDVIEDGMPEAGSPEVLEKYVLIAVLCSHPQLYARPTMDQVVKMLETEQSVPSIPERPIPLVAGRIDIERSAGSFGGSGQLSSPTGYRTFAYESECHSSNSKEEEGSSDSRILST 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1523 681 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 418 619 - -
Lele05g1523 681 SUPERFAMILY Protein kinase-like (PK-like) 314 612 IPR011009 -
Lele05g1523 681 Gene3D Transferase(Phosphotransferase) domain 1 418 620 - -
Lele05g1523 681 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 191 676 - -
Lele05g1523 681 Gene3D Phosphorylase Kinase; domain 1 300 416 - -
Lele05g1523 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Lele05g1523 681 Pfam SPARK 75 225 IPR043891 -
Lele05g1523 681 MobiDBLite consensus disorder prediction 659 681 - -
Lele05g1523 681 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Lele05g1523 681 CDD STKc_IRAK 343 612 - -
Lele05g1523 681 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 299 416 - -
Lele05g1523 681 ProSiteProfiles Protein kinase domain profile. 337 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1523 681 Pfam Protein kinase domain 338 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1523 681 SMART serkin_6 337 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1523 Lele-ChrLele05 9769755 9771800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1523 52 667 Receptor kinase-like Gene Family AT2G48010 63.166 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Lele05g1523 Pkinase 8.2e-42 CL0016