Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1503 ATGGCAATGTGCAGACTAACACAATCCCTAATAAATATCTCTTCTGTTAGTCCAAAAATAAACGTTACCCCTCTTCAGCGGCAGAAGGAGAAGGTTGTGTTGGTGATGGGGGCCACCGGCGCTGGGAAGTCCAGGCTCTCCATCGACCTCGCCACCCGTTTTCCTGCGGAGATCATCAACTCTGATAAAATACAAGTGTATGAAGGACTCGACACAGTGACAAACAAGATCACCGAGGAAGAACAACGTGGTGTTCCTCACCATTTACTAGGAACGCAGAATCCAAACTCAGAATTCACGGCCAGCAATTTCTGTGACATGGCTTCTCTTGCCATTGAGACAATTAGGGGTCGTGGAAAGCTTCCGATCATCGTCGGAGGCTCTAATTCGTTCCTGGAGGCTTTAATCGACGACGACTACAAATTCCGATCAAGGTACGATTTCTGTTGCCTGTGGGTAGACGTGGGCATGCCCGTTCTCAATGCGTACGTGGCAGAACGGGTGGATCAGATGGTCAAGAAAGGAATGGTGAACGAATTGAGGCCTTTTTTCAATCCAAAAGGGGACTATTCACGAGGGATCAGGAAGGCGATCGGAGTTCCGGAATTCGATAAATATTTTCGAAGGGAAGCACAGGTGGATGAGGATACGAGGCAGAGGCTGTTGGAGGAAGCGGTGAGGGAGATGAAGGAGAACACTAGGGAATTGGCGGGAAAACAGCTGGGGAAGATCCAGAGCCTGAGGAACGTGAAGAGATGGAAGATGCAGCGCGTGGACGCGACATCGGTGTTTCGGAAGCGCGGGGATGAAGAAGAGGCGAATGAGGAGTGGAGGAAGGTGGTAGCGGAGCCAAGTGCGATGATCGTCGCCCAGTTCCTTCGCAGCTTCACAACAACGAAGAGTGGTGTGACTGGGGGACTAAGATTGGCGCCGCTGGAGAGCGCCATTGCTTCGTCATCTTCGCATCTTCGATCTCTGGAGGCACACTCGTGCCCTGTCTAA 1002 0.514 MAMCRLTQSLINISSVSPKINVTPLQRQKEKVVLVMGATGAGKSRLSIDLATRFPAEIINSDKIQVYEGLDTVTNKITEEEQRGVPHHLLGTQNPNSEFTASNFCDMASLAIETIRGRGKLPIIVGGSNSFLEALIDDDYKFRSRYDFCCLWVDVGMPVLNAYVAERVDQMVKKGMVNELRPFFNPKGDYSRGIRKAIGVPEFDKYFRREAQVDEDTRQRLLEEAVREMKENTRELAGKQLGKIQSLRNVKRWKMQRVDATSVFRKRGDEEEANEEWRKVVAEPSAMIVAQFLRSFTTTKSGVTGGLRLAPLESAIASSSSHLRSLEAHSCPV 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1503 333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 143 IPR027417 -
Lele05g1503 333 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 157 255 - -
Lele05g1503 333 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 29 293 IPR039657 -
Lele05g1503 333 FunFam Adenylate isopentenyltransferase 5, chloroplastic 157 255 - -
Lele05g1503 333 Pfam IPP transferase 143 241 - -
Lele05g1503 333 Pfam IPP transferase 65 138 - -
Lele05g1503 333 Gene3D - 29 293 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1503 Lele-ChrLele05 9628194 9629195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1503 144 306 C2H2 Transcription Factor Family AT2G27760 29.474 1.05e-19 87.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1503 05 9628194 9629195 Lele13g2006 13 27392175 27393173 CCT
Lele05g1503 05 9628194 9629195 Lele14g1941 14 25722144 25723136 CCT
Lele05g1503 05 9628194 9629195 Lele15g0398 15 2289133 2290155 CCT
Lele05g1503 05 9628194 9629195 Lele16g0421 16 2273723 2274715 CCT
Lele05g1503 05 9628194 9629195 Lele05g1503 05 9628194 9629195 ECH
Lele05g1503 05 9628194 9629195 Lele07g1564 07 9637722 9638726 hybridization
Lele05g1503 05 9628194 9629195 Lele08g1354 08 8650102 8653633 hybridization