Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1502 ATGGAAGGACAAAGTAACCAAGAGAAACCTCCGAAGATGACGCTGTTTAATTCTGGAGGAAGTGGTAACCGTGTGTGTCATTCAGCTGAGGATTTCGAGAAAAATGGGAATAGGAGCCAGGGAACTTGCCTCCCCGAACCATTTCAGAATTATGTTGAGTATCTGACAGAAGCCACGCCATATCTGCCAAATACTACTGCCGAATATGCACTTGGGAGCTGTTATCCTCCTGTTGGCAGCTTACCCAATAATGTTAATGGGCTCAATAGAACAGAGACGAACTTGTTTTTCAATGATCCAGGAAAAGCATGCTGTTTTAAAGCTACTGATTCTTCTGCTGGGATAGACTTCAGGAAGGTGGGGTTTTGGAGACCAAATAGTGAAGGCCACCAATCCAAGAAATTTGCAACTAACCAACTCAATCATCATGCTGAGAGCCAGGCTCCGTGGAAGGAAGAATCAGCTGGAGATAAACATTCTCCCTCAAAATTTGATCCAAGGGTAACAGTGGCTGAACCTGGTTTCCTTCCCAAATCACGAAGCAGTTCATCAAAACAGAAAGCCACTGCAGCTGACCGTCAACGTAGGCAACGTATTGCTGATAACCTTAAAGCTTTGCACGGCTTGCTACCAGCTCCAGCAGAGGCTTGCTCGGCATATATACTGGATGATGTCATTGACTATGTCAAATATTTGCAGCTTCAGATAAAGGAATTGAGTGGAAGAAGATTGCAAGAATCAACTGTTATGCCGCTCACATTCCGTGAGGGCTATGGCCACTATATTAACCAGCAGATGCTGAACGAACCTCTTGAGGAGATGATGGGAAAACTAGTTGAGGAAAATCCGGAAGCAGCAGCTCAGCTGTTAGAGAATAAGGGCCTTTTTCTGTTGCCTTTGTCTTTGGCCGAAGACTTGCGCCAGGCTATGCACATGTTTGGTGGGATTCCACGAGTCTAA 960 0.4531 MEGQSNQEKPPKMTLFNSGGSGNRVCHSAEDFEKNGNRSQGTCLPEPFQNYVEYLTEATPYLPNTTAEYALGSCYPPVGSLPNNVNGLNRTETNLFFNDPGKACCFKATDSSAGIDFRKVGFWRPNSEGHQSKKFATNQLNHHAESQAPWKEESAGDKHSPSKFDPRVTVAEPGFLPKSRSSSSKQKATAADRQRRQRIADNLKALHGLLPAPAEACSAYILDDVIDYVKYLQLQIKELSGRRLQESTVMPLTFREGYGHYINQQMLNEPLEEMMGKLVEENPEAAAQLLENKGLFLLPLSLAEDLRQAMHMFGGIPRV 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1502 319 MobiDBLite consensus disorder prediction 1 29 - -
Lele05g1502 319 MobiDBLite consensus disorder prediction 1 24 - -
Lele05g1502 319 CDD bHLH_AtbHLH_like 191 240 IPR045239 -
Lele05g1502 319 MobiDBLite consensus disorder prediction 140 195 - -
Lele05g1502 319 Gene3D - 180 250 IPR036638 GO:0046983
Lele05g1502 319 Pfam Helix-loop-helix DNA-binding domain 185 233 IPR011598 GO:0046983
Lele05g1502 319 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 65 302 - -
Lele05g1502 319 MobiDBLite consensus disorder prediction 146 165 - -
Lele05g1502 319 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 183 232 IPR011598 GO:0046983
Lele05g1502 319 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 180 245 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1502 Lele-ChrLele05 9620441 9623057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1502 169 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 36.646 1.41e-19 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele05g1502 HLH 2.5e-05 No_clan