Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1500 ATGTTGAAGGAGAATATCACTAGGAATGAAGTATTGACAAACGATGATGTTTTGGGAGATCCTTTACCTTCAAATCGACTGCATTCAATGCGACTTGAGTGCTACCAACTGCTTAAGTTGGGCAAAGGGATTTCGCCTTGTGTATCAACTTGTTGGTTGATATTGTTTTACTGTCAGGGCTGGGATGATCCTTACGTCCCTCGCACACACGAAGATGAATCATATGCATCTTCCTATTCAGGGAAATTCATTGAAAGCTACTGGGATGGCGAGGAGAATCATTGGGTCTGTATGCGGATAAGGACTGACAAATCAACTCCAAATGAGGTCAATACCTCTAGAAAGGTAATGCGAAGCATAAAGGATAACATCACAGAAGAAGTTGTATTGAATGAGATAAATGAGATCATACGCCTTCCCTTGTACGCGGACAGAATAGGAAGGGATATAAAGGCTCATCAACAGATGGTCTCTGCAAGGCGAAGGGAAAAGCAAGCTGGGAAGAAGAAGAAGAAGTACTCACACGAGTCCGAATCAGAGGAAAAGAAGTCAGCGAACGATTCGGCAGAGAAGCTTCCTGCAGAGTTGCTGATGAGTCTATGGAGGGAAATTGACTCGAAACTGGAAACCCTGGAGGAGAAAATCAAGATGCTGAGTTTCCAAAAAGCCAGTGATTTCAGTGATAGTGTGAATAATTCTTCTGGTAGCTTCATGAAGGTTTATGATTGGGATGATCTCTTAACAAACACGATAGAATCATACGGCCAACCACTAAGGGTTTCTTCCGTACAACTAAATCCACCAACCCAATTTACAGAGGGGTTCATGGCCGTTTCTGCTGATACAGATTATTCATTTATTACTGATAATCTATGGGAGCCAGAAATAGAATTGCTTGGGGCACAAGACTCGACGGTGAATTCATTACAGAATTATAACCATTTGGGAAGCGATTGGAATCTCCTGCTTCAGTGGTGA 978 0.4243 MLKENITRNEVLTNDDVLGDPLPSNRLHSMRLECYQLLKLGKGISPCVSTCWLILFYCQGWDDPYVPRTHEDESYASSYSGKFIESYWDGEENHWVCMRIRTDKSTPNEVNTSRKVMRSIKDNITEEVVLNEINEIIRLPLYADRIGRDIKAHQQMVSARRREKQAGKKKKKYSHESESEEKKSANDSAEKLPAELLMSLWREIDSKLETLEEKIKMLSFQKASDFSDSVNNSSGSFMKVYDWDDLLTNTIESYGQPLRVSSVQLNPPTQFTEGFMAVSADTDYSFITDNLWEPEIELLGAQDSTVNSLQNYNHLGSDWNLLLQW 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1500 325 SUPERFAMILY Nucleic acid-binding proteins 55 147 IPR012340 -
Lele05g1500 325 MobiDBLite consensus disorder prediction 154 188 - -
Lele05g1500 325 MobiDBLite consensus disorder prediction 170 188 - -
Lele05g1500 325 Gene3D - 60 139 IPR012340 -
Lele05g1500 325 PANTHER MRNA-CAPPING ENZYME 75 143 - -
Lele05g1500 325 Pfam mRNA capping enzyme, C-terminal domain 74 129 IPR013846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1500 Lele-ChrLele05 9607807 9614990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1500 39 162 Protein tyrosine phosphatase (PTP) family AT3G09100 45.882 2.76e-33 127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1500 05 9607807 9614990 Lele08g1350 08 8626170 8634218 hybridization