Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1441 ATGGTTCTACCTCAACAGCCGATACAGGGACTTCATGAAACAGGACCGCCTCCATTCCTCACCAAGACATTTGATATGGTGGACAACCCTTCAACCGATCACATAGTCTCGTGGAGCAGAGGAGGATCAAGTTTTGTTGTTTGGAATCCATGTTCTTTCTCTGCCAATCTCCTTCCTAGATGCTTCAAGCACAACAATTTCTCCAGCTTTGTCAGGCAATTGAACACTTACGGTTTTAGAAAAATTGACTCAGACAGATGGGAGTTTTCAAATGAAAAGTTCATCAGAGGACACAGGCATCTACTGAGGAACATACGAAGAAGGAGAGCACCTTCTCAGGTTTCTCAGGTTACTCCATCCTCCCAAAGACCGGGTCATTGTGTTGAAGTTGGTAGTTTTGGAGTAGAAGAAGAAATTATACGTTTAAGGCGTGACAAGCAAGTGTTAATGATGGAGCTTGTGAAGCTTAGACAACAGCAACAGAACACCAGAGCCTATGTTCAGGCGATGGAGCAGAGGTTACAAGGCACAGAAATGAAGCAGCAACAAATGATGGCTTTCTTAGCTAGAGCTTTGAAAAATCCTACTTTTCTCCACCAACTAGTCCAACAGAGTAAGACAAAGGAACTGGAAGAAGCCATGACTAAGAAAAGAAGAAGGTCAATTGAGCTAAGACCAATTGATGTTGCGGAATCAAGCAGTGAAAGTGAGGGAAGGAATAATCCTGTTAAAGTTGAAGCGTCTGAGCTTGAAGTTCTAGCTATGGAAATGCAAGGTCTAGGTAAGGGTAAGCGAGAACAGGAAGCACTTTAA 813 0.4317 MVLPQQPIQGLHETGPPPFLTKTFDMVDNPSTDHIVSWSRGGSSFVVWNPCSFSANLLPRCFKHNNFSSFVRQLNTYGFRKIDSDRWEFSNEKFIRGHRHLLRNIRRRRAPSQVSQVTPSSQRPGHCVEVGSFGVEEEIIRLRRDKQVLMMELVKLRQQQQNTRAYVQAMEQRLQGTEMKQQQMMAFLARALKNPTFLHQLVQQSKTKELEEAMTKKRRRSIELRPIDVAESSSESEGRNNPVKVEASELEVLAMEMQGLGKGKREQEAL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1441 270 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 7 231 IPR027725 -
Lele05g1441 270 Coils Coil 139 159 - -
Lele05g1441 270 MobiDBLite consensus disorder prediction 223 247 - -
Lele05g1441 270 SMART hsfneu3 15 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele05g1441 270 PRINTS Heat shock factor (HSF) domain signature 57 69 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele05g1441 270 PRINTS Heat shock factor (HSF) domain signature 19 42 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele05g1441 270 PRINTS Heat shock factor (HSF) domain signature 70 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele05g1441 270 Gene3D - 11 109 IPR036388 -
Lele05g1441 270 ProSitePatterns HSF-type DNA-binding domain signature. 58 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele05g1441 270 FunFam Heat shock transcription factor 1 12 109 - -
Lele05g1441 270 SUPERFAMILY "Winged helix" DNA-binding domain 15 108 IPR036390 -
Lele05g1441 270 Pfam HSF-type DNA-binding 19 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1441 Lele-ChrLele05 9217077 9217980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1441 6 270 HSF AT3G22830 52.759 4.02e-102 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele05g1441 HSF_DNA-bind 9.4e-32 CL0123