Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1437 ATGGACCAAGAAAGTGTTGATCACTTATATCTGTCTCGAGATGGCGATGCCTTGATTCTGGCTTTCCACATTATATGGGGGAATATGTATAGCACGTATGACAGCAATTTTACTGAGCCCTGGCCAGTAGCTGCCGCCTCCGGCCACACATCCTTTGAGTTAGGTAATATGAGTCAGAAGAAGAACCCTCTTGTGTTTTTAGACGTCTCAATGGATGGGGATCCTGTAGAAAGAATTGTTATTGAGCTTTTTGCCAGTATTGTTCCTAAGACAGCTGAGAATTTTCGGGCACTCTGCACAGGTGAGAAGGGCATTGGAAAATCAACTGGAAAGCCTCTGCATTATAGAGGAACTTGTTTTCATCGTATAATTAAAGGATTCATGGCCCAAGGCGGTGACTTTTCAAGGGGCAATGGCACTGGTGGAGAAAGTATATATGAAGGAAAGTTCGCTGATGAAAATTTCATATTAAAGCATGATGGACCTGGTCTTCTATCCATGGCTAATGGTGGTCCAAACACAAATGGTTCCCAATTCTTTATTACCTTCAAGCGCCAACCACATCTTGATGGGAAACATGTTGTTTTTGGAAAAGTTGTTAGTGGATTAGATCTTCTGAAGAAAATTGAACTGGTGGGGACACCAGATGGGAAACCTGTCCAGCCGGTTAAGATAATTGATTGTGGTGAAACGACTGAAGCGAAAATTCAGCAAAAAATTGGGAAAGGGAAAGGTAAAAAGAGAAAATCTGGGGAATCCTCAATTTCTGGTGATAGTACTGACAAAAAATCCAAAGGAAAAAGGAAAACATCTTCCAAGGATTTGAGGAAGAGGAGGAGATACTCTACATCTGATTCATACAGCTCTGATAGTGATAGTGACTCTGTTTCTTCTGAATCTGACTCAGATTCAGGGTCAGATTCGTCGCTTTCTGATTCAAGTTCCTCTAGCTATGGTAAACATGGGAAGAGGAAACCTGTGAAAAGATCTAGGCACAAGCAAGGGAAGAAGAGAAGAAATGGGCGAAAGGAAAAGAGAAACCGGCATAATAGACGATCTAGACGCAAGTCCAAATTAAGCTCAGCAGATTCAAGTGATACTGAAATTGATAGTATTAGTGGTGGTGACAGTAGTTCTGATGATGAGAAAGCTCACCGCCGTGTCTCTAGTCATAGAACACATGCTGACAACAAACAAAAAAGAAATTTAGAAACAGGAAAGCAATCTCCCAGCCCTCCTTTAGTTAGAACTGCACCAGATCAAGGGAAAGATTCCAAGGTCAAAAGAATTGAGGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCAGAAAATTCTGAGTTTCTGAATAATGGGCATGATAGTGAAGCCAAATTCAGTAAACCTGCTAAGCAACCCACTCATTTGGATGATTCTAATGACAATAGAGGTGCAAGTCCTAGAAGAAGTGATGCTATGAATCCCACTAGGGAGTTAGTTGAGCAAAACCAAGGAGGTGCTTTATTGACGAGCACCCGCCAACCTGCTGCTTCCAAACACGGTCAGGGTTTGTCGAAAAGCCCTTCACCAAATGGTGAACCAAAGCGTATTAGAAAAGGACGTGGCTTCACTGAGCGCTATGCCTTTGCACGCAGATATCGTACTCCATCTCCAGATCGGTCAGCCCATTCCTATCGCTATGGGGATAGAAATATAAGAAGGAACTTCGACAGGCGTACAAGCTACAGAAACTACTCTGAGCGTTCCCCACAGAGACGCTATGGAAGCCCTCCGCGCAGGAGCCGTCCAAGATACCAAAGCAGAAGAAGCCGGAGTAGGAGCATCTCTCACAGTCCAGTGCGTGGCCATTTTAGGGACCGTGGTCGCAGCCAGAGTCCAATGCGTAGCCCCACTCCAGACGACAGGCGACCTCCAATAAGTGAGAGATTAAAATCCCGACTTGGTCCTCAAAGTGTTCGGCAATCTACAGACAGAAGGGCAAGGGCCAGGTCCAATTCCAGGGATCATATGTCTCCGGCTAGATCCCCTGATGCTACCCCACCTAGGCGTCATGATAAAAGGACTTCTGCATCTCCAAGCAGGTCTAGATCTAGTTCGTCATCCGGACAGAAGGGATTAGTTTCCTATGGCGAGGCCAGTCCTGATTCCGGGGCAAGGTAG 2160 0.4491 MDQESVDHLYLSRDGDALILAFHIIWGNMYSTYDSNFTEPWPVAAASGHTSFELGNMSQKKNPLVFLDVSMDGDPVERIVIELFASIVPKTAENFRALCTGEKGIGKSTGKPLHYRGTCFHRIIKGFMAQGGDFSRGNGTGGESIYEGKFADENFILKHDGPGLLSMANGGPNTNGSQFFITFKRQPHLDGKHVVFGKVVSGLDLLKKIELVGTPDGKPVQPVKIIDCGETTEAKIQQKIGKGKGKKRKSGESSISGDSTDKKSKGKRKTSSKDLRKRRRYSTSDSYSSDSDSDSVSSESDSDSGSDSSLSDSSSSSYGKHGKRKPVKRSRHKQGKKRRNGRKEKRNRHNRRSRRKSKLSSADSSDTEIDSISGGDSSSDDEKAHRRVSSHRTHADNKQKRNLETGKQSPSPPLVRTAPDQGKDSKVKRIEDKQSHEEGELSPENSEFLNNGHDSEAKFSKPAKQPTHLDDSNDNRGASPRRSDAMNPTRELVEQNQGGALLTSTRQPAASKHGQGLSKSPSPNGEPKRIRKGRGFTERYAFARRYRTPSPDRSAHSYRYGDRNIRRNFDRRTSYRNYSERSPQRRYGSPPRRSRPRYQSRRSRSRSISHSPVRGHFRDRGRSQSPMRSPTPDDRRPPISERLKSRLGPQSVRQSTDRRARARSNSRDHMSPARSPDATPPRRHDKRTSASPSRSRSSSSSGQKGLVSYGEASPDSGAR 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1437 719 MobiDBLite consensus disorder prediction 656 670 - -
Lele05g1437 719 MobiDBLite consensus disorder prediction 286 317 - -
Lele05g1437 719 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 115 132 IPR020892 GO:0003755|GO:0006457
Lele05g1437 719 CDD cyclophilin_ABH_like 63 229 - -
Lele05g1437 719 MobiDBLite consensus disorder prediction 489 522 - -
Lele05g1437 719 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 65 230 - -
Lele05g1437 719 MobiDBLite consensus disorder prediction 321 356 - -
Lele05g1437 719 MobiDBLite consensus disorder prediction 376 403 - -
Lele05g1437 719 MobiDBLite consensus disorder prediction 588 611 - -
Lele05g1437 719 MobiDBLite consensus disorder prediction 247 268 - -
Lele05g1437 719 MobiDBLite consensus disorder prediction 421 443 - -
Lele05g1437 719 MobiDBLite consensus disorder prediction 692 707 - -
Lele05g1437 719 MobiDBLite consensus disorder prediction 457 478 - -
Lele05g1437 719 Gene3D - 53 239 IPR029000 -
Lele05g1437 719 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 66 230 IPR002130 GO:0000413|GO:0003755
Lele05g1437 719 MobiDBLite consensus disorder prediction 525 579 - -
Lele05g1437 719 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 57 238 - -
Lele05g1437 719 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 76 229 IPR002130 GO:0000413|GO:0003755
Lele05g1437 719 SUPERFAMILY Cyclophilin-like 59 231 IPR029000 -
Lele05g1437 719 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 83 98 IPR002130 GO:0000413|GO:0003755
Lele05g1437 719 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Lele05g1437 719 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 163 178 IPR002130 GO:0000413|GO:0003755
Lele05g1437 719 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 178 190 IPR002130 GO:0000413|GO:0003755
Lele05g1437 719 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 191 206 IPR002130 GO:0000413|GO:0003755
Lele05g1437 719 MobiDBLite consensus disorder prediction 236 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1437 Lele-ChrLele05 9151374 9161085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1437 81 227 U-box Gene Family AT5G67530 47.651 8.58e-31 126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1437 05 9151374 9161085 Lele05g1437 05 9151374 9161085 ECH
Lele05g1437 05 9151374 9161085 Lele07g1501 07 9160601 9165943 hybridization
Lele05g1437 05 9151374 9161085 Lele08g1295 08 8237133 8246935 hybridization