Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1435 ATGGAAGCAAATATTCTGACAGTGAGCAGAAATCCAGCAGTAACTGCAGCACACAGGAAGTTCAAACATAAACCAAGATATCCCCGTGTGGTTGGAGTGCTGACAAGACCTGCAGATAACATTACAGAAGAAACAAGACAAACCAGTGTCTATAAAGACAACTGGTTCGATCGCTTGGCTATACACCATCTTTCTAAGAACGTTCAAGAGGCATCAGGACTCATTAACAGCAAGAGTGGATATGACAGCTTGGTTGAGGCAGCTACTGTGGTTTCTCAGAAATTCAATCCTTCTCAGCAACGTGAAATTGTCATTCAAGCTCTGGACAGAAGCTTCCCAAGGCCAATACTCTCCTTTATAAGGACAGTGCTGCCGCCCTGTAGATTGGCAAGGGAATATTTCGCCGCCTTTACAACTTTGTTTTTTGCTTGGTTAGTCGGGCACTGCGAGGTGAGGGAATCAGAGGTCAACGGGATAAGAGAAAAAAATGTTGTCCACATAAAAAAGTGCAGGTTTTTGGAACAGACAAATTGTGTCGGGATGTGCGTTAATATCTGCAAAACGCCATCTCAATCATTTATAAAGGACTCTTTGGGCATGCCAGTCAAAATGGTTCCAAATTTTGATGACATGAGTTGTGAGATGATATTTGGCGAGGATCCTCCAGCATCAACAGATGATCCAGCACTTAAGCAACCATGCTATAAACTATGTAATGACTTTATGATGTTGATTTACATTTTCTAA 747 0.4203 MEANILTVSRNPAVTAAHRKFKHKPRYPRVVGVLTRPADNITEETRQTSVYKDNWFDRLAIHHLSKNVQEASGLINSKSGYDSLVEAATVVSQKFNPSQQREIVIQALDRSFPRPILSFIRTVLPPCRLAREYFAAFTTLFFAWLVGHCEVRESEVNGIREKNVVHIKKCRFLEQTNCVGMCVNICKTPSQSFIKDSLGMPVKMVPNFDDMSCEMIFGEDPPASTDDPALKQPCYKLCNDFMMLIYIF 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1435 248 PANTHER BETA-CAROTENE ISOMERASE D27 39 238 IPR038938 -
Lele05g1435 248 Pfam Beta-carotene isomerase D27-like, C-terminal 144 224 IPR025114 GO:0005506
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1435 Lele-ChrLele05 9127958 9131008 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2266 13 28776579 28779048 Lele05g1435 05 9127958 9131008 CCT
Lele14g2202 14 27120825 27123350 Lele05g1435 05 9127958 9131008 CCT
Lele15g0146 15 894153 896957 Lele05g1435 05 9127958 9131008 CCT
Lele16g0151 16 915661 918188 Lele05g1435 05 9127958 9131008 CCT
Lele05g1435 05 9127958 9131008 Lele07g1499 07 9148420 9151697 hybridization
Lele05g1435 05 9127958 9131008 Lele08g1293 08 8227113 8230326 hybridization