Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1430 ATGGCCAACAGAGTTCAAATTCCTTCAAGAAATTCCGCACTCATTGCAATGATTGCAGATGAGGACACTGTTGTTGGATTTTTGCTGGCTGGGGTGGGCAATGTTGACTTGCGTAGGAAGACGAACTACCTTATTGTGGACTCAAAAACCACTGTCAAACAAATAGAAGATGCATTCAAAGAGTTCACAACAAGGGAGGATATTGCAATTGTGCTGATTAGCCAATATGTTGCAAACATGATAAGGTTTTTAGTTGATAGCTACAACAAGCCTGTTCCTGCGATATTGGAGATTCCTTCTAAAGACCATCCTTATGATCCAGCGCATGATTCAGTTCTTTCACGAGTGAAATATTTATTCTCTGCTGAATCTGTGGCGTCTGGGAGACGTTAA 393 0.4122 MANRVQIPSRNSALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVLISQYVANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLFSAESVASGRR 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1430 130 SUPERFAMILY AtpF-like 15 99 IPR036906 GO:0034220
Lele05g1430 130 Pfam ATP synthase (F/14-kDa) subunit 15 116 IPR008218 GO:0034220|GO:0046961
Lele05g1430 130 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 1 126 - -
Lele05g1430 130 TIGRFAM V_ATP_synt_F: V-type ATPase, F subunit 11 124 IPR005772 GO:0033180|GO:0046961|GO:1902600
Lele05g1430 130 FunFam V-type proton ATPase subunit F 9 122 - -
Lele05g1430 130 PIRSF V-ATP_synth_F 3 123 IPR005772 GO:0033180|GO:0046961|GO:1902600
Lele05g1430 130 Gene3D ATPase, V1 complex, subunit F 9 122 IPR036906 GO:0034220
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1430 Lele-ChrLele05 9085137 9087201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1430 1 126 Primary Pumps ATPases(2) AT4G02620 88.889 9.41e-83 236