LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele05g1418	ATGGAAGAGATTGAAGAAGCTAACAGAGCAGCTGTTGAAAGCTGTCATAAGGTTCTAAGCTTGTTGTCTCAGTCTCATCCCCAAGATCAAGTTCAGCACAGGAAGTTAATGGTAGAAACTGGGGAGGCTGTGGGGAAGTTCAAGAAAGTTGTTTCTCTGCTCAGTAACGGTTTGGGTCATGCAAGAGTCAGGAAACTCAAAAGACTTCAAATTCCTATTCCTCAAAGCGTACTCTTAGACAACCCTAATTGTAGAACTAATTATCAATCAAAAAATTTGCAATTCCCCCAAAACAGCTTTAGGGAGGAGTCGATTCAGGAATTGAAAAATTCACTCTCCCTGGGAAATCCATCGTTGGAATTGAGCTCGAGTGGGAAAAGTTCTCTCCAACTTAGCCAACAACAAGCATCTTCACAGCACAATCACTTCCTTCAGCAGCAGCAACAAAGGTTATTGCTACAGCATCATCAACAGCAGATGAAACACCAAGCGGATTTGATGTATCGAAGGAACAATAGTGGCATAAATCTGAATTTTGATAGCTCTAGCTGTACACCTACAATGTCATCAACTAGGTCTTTTGTTTCTTCCTTAAGCATAGATGGAAGCTTAGCTAACATGGATGGAAGTGCCTTTCATTTAATCGGTGCTCCTCTATCTTCGGATCAGAATTCACTTCAGCATAAAAGAAAGTGTTCTGGCAGAGATGAGGGCAGCGTCAAGTGTGGGAGCAGCAGTACCAGGTGCCACTGCTCAAAGAAGAGGAAACACAGAGTAAAGAGATCAATTAAGGTTCCTGCTATCAGCAACAAGCTGGCAGATATACCCCCTGATGATTATTCATGGAGAAAGTATGGGCAGAAGCCCATTAAGGGCTCTCCTCACCCTAGGGGATACTATAAGTGCAGCAGCATGAGAGGTTGCCCTGCTAGGAAGCACGTTGAGAGGTGTGTGGAAGACCCTTCCATGCTGATTGTTACCTACGAAGGCGAGCATAACCACCCTAAAATACCAACGCAATCTGCAAATGCATGA	1035	0.4377	MEEIEEANRAAVESCHKVLSLLSQSHPQDQVQHRKLMVETGEAVGKFKKVVSLLSNGLGHARVRKLKRLQIPIPQSVLLDNPNCRTNYQSKNLQFPQNSFREESIQELKNSLSLGNPSLELSSSGKSSLQLSQQQASSQHNHFLQQQQQRLLLQHHQQQMKHQADLMYRRNNSGINLNFDSSSCTPTMSSTRSFVSSLSIDGSLANMDGSAFHLIGAPLSSDQNSLQHKRKCSGRDEGSVKCGSSSTRCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCVEDPSMLIVTYEGEHNHPKIPTQSANA	344

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele05g1418	344	FunFam	WRKY transcription factor 65	260	337	-	-
	Lele05g1418	344	Gene3D	WRKY domain	267	338	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele05g1418	344	ProSiteProfiles	WRKY domain profile.	271	337	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele05g1418	344	PANTHER	WRKY TRANSCRIPTION FACTOR 21-RELATED	2	341	IPR044810	GO:0003700
	Lele05g1418	344	MobiDBLite	consensus disorder prediction	116	145	-	-
	Lele05g1418	344	SMART	WRKY_cls	276	336	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele05g1418	344	Pfam	Plant zinc cluster domain	229	274	IPR018872	-
	Lele05g1418	344	Pfam	WRKY DNA -binding domain	278	335	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele05g1418	344	SUPERFAMILY	WRKY DNA-binding domain	274	336	IPR036576	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele05g1418	Lele-ChrLele05	8986908	8988686	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele05g1418	1	341	WRKY Transcription Factor Family	AT2G30590	56.728	4.00e-130	375

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Lele05g1418		WRKY	1.5e-26	CL0274