Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1401 ATGGCTTGTTCTGGAAGTAATTGTGGGAATGGGGGGTCTGGGTCTCCTTGCGGGGCATGCAAGTTTCTGAGAAGGAAGTGTGCGGCTGACTGTATATTTGCGCCATATTTCTGCTCCGACCAAGGCCCTAGTAGTTTTGCCGCCATTCACAAGGTGTTTGGAGCTAGTAATGTTTCCAAACTTCTCTTGAACTTACCTGCCCATGATCGTTGTGAGGCTGTCCTCACTATTGCCTATGAAGCTCAGGCTCGTATCAGAGACCCTGTTTATGGCTGTGTCTCCCACATTTTTGCCTTGCAACAACAGGTGGCATGCTTGCAAGCACAGCTGATGCAAGCCAAAGCGCAGTTGGCTCAGAAGAGCATGGAGAACAATAATGAAGAGTACTGGGGAAGGAATAATGGTTATGGGCAAACAATGAATCCAATGTATGGAACTAGTTACACCAACATGAACCCTATATCTCCCCAGAGTTCTCTTGACTCCATTGATTACTCTAGAATCCACGATAATGGATCCATGATGAGTAGTTTGCAGCAAGAGGGTTTCTCTCTCCAGCAACAAGCTCGCTCCAAGAAAAGCCCATCTTATGATAGCAATGACTTGAGCGAGCTTCAAGAGCTAGCACTTAGAATGATGAGAAACTAG 648 0.4645 MACSGSNCGNGGSGSPCGACKFLRRKCAADCIFAPYFCSDQGPSSFAAIHKVFGASNVSKLLLNLPAHDRCEAVLTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQAKAQLAQKSMENNNEEYWGRNNGYGQTMNPMYGTSYTNMNPISPQSSLDSIDYSRIHDNGSMMSSLQQEGFSLQQQARSKKSPSYDSNDLSELQELALRMMRN 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1401 215 Coils Coil 96 128 - -
Lele05g1401 215 PANTHER LOB DOMAIN CONTAINING PROTEIN 12 203 - -
Lele05g1401 215 ProSiteProfiles LOB domain profile. 15 117 IPR004883 -
Lele05g1401 215 MobiDBLite consensus disorder prediction 177 200 - -
Lele05g1401 215 Pfam Lateral organ boundaries (LOB) domain 16 114 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1401 Lele-ChrLele05 8864330 8865364 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1401 1 215 AS2 family AT2G42430 54.251 1.94e-76 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele05g1401 LOB 1.7e-36 No_clan