Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1400 ATGACAGGTTCCGGTTCTCCCTGTGGAGCCTGCAAATTCTTGAGAAGGAAATGTGTGAGAGGCTGTGTTTTTGCACCTTACTTTTGCCATGAACAAGGCGCTACCCATTTTGCGGCCATTCATAAGGTTTTTGGTGCAAGCAACGTCTCTAAGCTTCTTGCTCACCTCCCTGTAAGTGACCGTTGCGAAGCTGCAGTCACCATCTCTTATGAAGCTCAAGCCAGACTTCAGGATCCTATTTATGGCTGCGTTTCCCATATCTTCGCCCTCCAACAACAGGTGGTTAATTTACAAGCACAGCTAGCATATCTGAGGGAACAGGCAGCTCAGAGCAATATTCTGAATGTCTCTGCCACTGAAGACCCTAATAAACCTGCTGCTTTCTCTGATCATGACCTTCACAAGTGGTTCCGAACGGAGAATTCCAACACAGCGGGGACTCAGTTTCTTCCCAGTTCGTCTGATATTAATTCTTTTGCAACACAGTGCTACGGAAATTATTTAACTCCCTTTGTGAATCCAAACGCTATTGGGGATTACAAAAGCTCATCAGGAACCATGGAAGAAAGTGCTTCGTTTTCGAGCTTTCATGATCAGGAGACAAACTGTAACTCTGTGTCCTTTGACATGCAAGCAAGCAGTAGGAAGTGGGGCTTTCATGAAGTGGATGATCTTCAATCTGTGGCTTTTGGTTACAGTGGATGA 705 0.4553 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLAYLREQAAQSNILNVSATEDPNKPAAFSDHDLHKWFRTENSNTAGTQFLPSSSDINSFATQCYGNYLTPFVNPNAIGDYKSSSGTMEESASFSSFHDQETNCNSVSFDMQASSRKWGFHEVDDLQSVAFGYSG 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1400 234 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 187 - -
Lele05g1400 234 Coils Coil 87 107 - -
Lele05g1400 234 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Lele05g1400 234 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1400 Lele-ChrLele05 8855176 8855979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1400 1 195 AS2 family AT2G42440 56.872 1.35e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele05g1400 LOB 5.6e-36 No_clan