Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1399 ATGGCCTTCGCCTCTTTTCTTGGCAGAGTCCTCTTCGCCTCCGTTTTCATTCTCTCTGCTTACCAAGAATTCAATGAATATGGGGTAGATGGGGGACCTGCAGCAAAGGCACTCAGACCGAAGTTTGATGCTTTTACGCATCGGGTGCATTCTCATGCTGGCTTTCAACTTCCAGAAATTAATATTAAATATTTGGTTGCGGGTGCTATTGCGCTCAAGGGAATTGGGGGGCTTCTTTTCATCTTCGGAAGCGCTTTTGGAGCTGTCCTCCTGCTTCTTCATCAGATGATTGTGACTTCAATACTGTATGACTTCTACAATTATGATAATGAGGGCAAAGAGTTCAATCAACTTTTCATCAAATTCACACAGAATATGGCTCTTTTTGGGGCTCTGTTGTTTTTCATTGGAATGAAAAACTCGATTCCCAAAAGGCAACCCAAGAAGAAGGTTCCCAAAACAAAAACCTATTAG 474 0.4262 MAFASFLGRVLFASVFILSAYQEFNEYGVDGGPAAKALRPKFDAFTHRVHSHAGFQLPEINIKYLVAGAIALKGIGGLLFIFGSAFGAVLLLLHQMIVTSILYDFYNYDNEGKEFNQLFIKFTQNMALFGALLFFIGMKNSIPKRQPKKKVPKTKTY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1399 157 Pfam HR-like lesion-inducing 1 138 IPR008637 -
Lele05g1399 157 PANTHER HR-LIKE LESION-INDUCER 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1399 Lele-ChrLele05 8840747 8842963 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1926 13 26887795 26888475 Lele05g1399 05 8840747 8842963 CCT
Lele05g1399 05 8840747 8842963 Lele07g1463 07 8898844 8901898 hybridization
Lele05g1399 05 8840747 8842963 Lele08g1252 08 7959544 7961669 hybridization