Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1398 ATGCCCAGAATGCGTAGGATATCAAATAGGAGGGTGACTGGGAAAAGGAAGAAGCTTTATCAAGCTCCTGAAGTAGAGTTTGAAGCTTTGGGTAGTGGGACTTGTACTGGAATTCGCACGTGTTGTGCGAGTGATGGGTACGGATCTTCTTCTGTTGCCAACGGTTGGACCGCCATTAAAACGGCGAGCAGGGTTGAGAAAGAAGCAAGCTGGAAGAGGATCTTACAGGGGAAGCTAGGTCACGGGCATTGTGGGATCTTGACATGGGAGGATGTTTACTATGACAATCCTGATAAACATGGCTCTTTCGAGAATAAGCCCAGCCAGAAGGCCTTGGAACAGGATGATGGTGGTCAATTCTCACATGACCCTCTAGGGTTAGCTGTGGCAAAGATGTCATATCGTGTATATACTTTAGGGGAAGGGTATGACTATCCCAACACGTATGATGCTTTTGTAGCTGTTACTGGAAATCATCGGTGGATCTGTGCAGGTAATCAAGTTGCAGGTCCTGGCTCATCATATGAGTTTTCTGTTGGAATCAAGACCATTGCTGTTGTAGCTGTAGTTCCACTTGGAGTTGTTCAGCTTGGCTCATTAAATAATGTGATAGAAGATACAGAGTTCGTAACTCGTATCAGAAATCTTTTTCTGGCTGCTCAGCATTACACAATAGGTCATTCTCTAGATCAAATACAAAGTAGTGCGAAGAATGTCTCGCCTCTGGATATAGAGAAAATCGGAAAGAGTGAGACACTGAATAACTTGATATCCTTCCCTTGTTCTGAAAAGAGCTTTTCACCTTCCAGTGTTACTCAGGAAATGGCTGTTGATATGGCCAAGCATGAGGGGTCTGAATTTAACCAAAGTTACATCTTGCTTCAGTCAGTGTCAAATTTGATGGATCTGGAGGATCAGAAATTCTTAGAGATGAGATCTCTAAACAAGAGAGAGCATGAAGTGGGCAGTAGTGGCTGCAAAGAAATGAGGGTGGAATCAGAAAAAAATATGTCATCATTGGCACTCAAATCTGTTTCAAATGATAACAGCCTCCAAGATTTAATATGTCCATCAGAAAAGGTTGGAGCTCATTCTGCCGGTATCCCTGCTGACTTAGTTGATGCTGTTGTTTATGGGAATGATAAACTCTCGTATGTGGAGCTTAACCAACAAGGCGTTTTCAGTGTCTTTAGACCTTCAGATGCAAACTTCCAAATGGGCACATTAAAGTCAGAGTTTCAGACTGATCCTTGTTACGAGGATGTCCCATTCACAATATTAAAGTTCCCTGCTGGCTGTGAGCTGCAAGAAGCACTTGGACCAGATTTTCTGAAACGAAGTAAATACTGTAATTTGGGGGCATGGGTGAATCAAGATTTTAAAACTGCAGAGATGCCAGATAAGATTAGGTGTAGCCAGTTGACTTCTGAATCTCGTCAAGAACATCTTTTGGAGGAAGTAGTCGCCAATGTTCACCACAGCAATAATGATGCAAATAGCGACTTATCGTTTTGTACATCAGTGCAGTCCGGCATAGCATCTGGAAGAAATCGTGAAGCTTCTATTCACACCATACGCACAATTAATTCGGAATGTTATTCTATAGATCGGTCCTCTCTTATCAGTGAGGACAAACAGCCCTGTGAGAGTTCATCTGGAATCTGTGGTGTAATTTCCCCCAAAGGTTTTTCTTCTGCGTGTCCTAGTTCATGTAGTGAACGGTTTGAAAGGTCTTCTGAACCAGCTAAGAACAAGAAGAGGGCTAGGGCAGGGGAATCTTGTAGGCCAAGGCCAAGGGACAGACAACTGATTCAAGATCGTATTAAGGAGTTGAGAGAGTTAGTGCCAAATGGAGTAAAGTGCAGTATTGATTCGCTGCTGGAGCGCACGATAAAGCACATGCTCTTTTTGCAGAGCATAACTAAGCATGCTGATAAGCTAAACAAATTTGCCGACACCAAGACAAAGGTACATCACATGGAAGCAGATGTCCTTGGATCATCTGGTTACGAACAGGGTTCAAGTTGGGCAATGGAAGTAGGAGGCCATTTGAAAGTTCATTCAATATTAGTGGAGAATCTTGACAAGAATGGGCAGATGCTCATTGAGATGCTGTGTGAGGAGTGTACACATTTTCTTGAGATAGCAGAAGCCATAAGAAGCTTGGGCCTGACAATTTTGACAGGTGCAACAGAAGCTCGTGATGAGAAGACATGGATATGTTTTGTGGTTGAGTGGCCAGAACTGCTCACATTGCAACCCATATCATTAAACAAAACTACTGTATTAGTTCAATTGATCAAGTGCTTAAATTCAGAGCTTGGTATCAGACTCAACTTTCTTTGTTCTTCTGGGTTTCAAAACATTTTGATTTTTGGGGAACTCTGA 2388 0.4271 MPRMRRISNRRVTGKRKKLYQAPEVEFEALGSGTCTGIRTCCASDGYGSSSVANGWTAIKTASRVEKEASWKRILQGKLGHGHCGILTWEDVYYDNPDKHGSFENKPSQKALEQDDGGQFSHDPLGLAVAKMSYRVYTLGEGYDYPNTYDAFVAVTGNHRWICAGNQVAGPGSSYEFSVGIKTIAVVAVVPLGVVQLGSLNNVIEDTEFVTRIRNLFLAAQHYTIGHSLDQIQSSAKNVSPLDIEKIGKSETLNNLISFPCSEKSFSPSSVTQEMAVDMAKHEGSEFNQSYILLQSVSNLMDLEDQKFLEMRSLNKREHEVGSSGCKEMRVESEKNMSSLALKSVSNDNSLQDLICPSEKVGAHSAGIPADLVDAVVYGNDKLSYVELNQQGVFSVFRPSDANFQMGTLKSEFQTDPCYEDVPFTILKFPAGCELQEALGPDFLKRSKYCNLGAWVNQDFKTAEMPDKIRCSQLTSESRQEHLLEEVVANVHHSNNDANSDLSFCTSVQSGIASGRNREASIHTIRTINSECYSIDRSSLISEDKQPCESSSGICGVISPKGFSSACPSSCSERFERSSEPAKNKKRARAGESCRPRPRDRQLIQDRIKELRELVPNGVKCSIDSLLERTIKHMLFLQSITKHADKLNKFADTKTKVHHMEADVLGSSGYEQGSSWAMEVGGHLKVHSILVENLDKNGQMLIEMLCEECTHFLEIAEAIRSLGLTILTGATEARDEKTWICFVVEWPELLTLQPISLNKTTVLVQLIKCLNSELGIRLNFLCSSGFQNILIFGEL 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1398 795 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 80 746 IPR043561 GO:0003700|GO:0006355
Lele05g1398 795 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 86 217 IPR025610 -
Lele05g1398 795 MobiDBLite consensus disorder prediction 576 600 - -
Lele05g1398 795 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 588 637 IPR011598 GO:0046983
Lele05g1398 795 MobiDBLite consensus disorder prediction 575 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1398 Lele-ChrLele05 8832877 8838981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1398 431 783 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 50.416 2.27e-80 271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1398 05 8832877 8838981 Lele13g1930 13 26912682 26917817 CCT
Lele05g1398 05 8832877 8838981 Lele14g1863 14 25243691 25249102 CCT
Lele05g1398 05 8832877 8838981 Lele15g0478 15 2795530 2802434 CCT
Lele05g1398 05 8832877 8838981 Lele16g0498 16 2756650 2761452 CCT
Lele05g1398 05 8832877 8838981 Lele05g1398 05 8832877 8838981 ECH
Lele05g1398 05 8832877 8838981 Lele07g1462 07 8890959 8896693 hybridization
Lele05g1398 05 8832877 8838981 Lele08g1251 08 7953236 7958300 hybridization