Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele05g1389 | ATGGAGGTGAAGCAGGTTCCTACAATCATTGCTCTACGTCAACCCCTTCTTTATCTACTCTTTGCCATCTCTGCAAGCTATCTGTTCTTCTTTCTCATATCGCTGAGCCCTGAGGCTCTCTTCCACTGCTCGTCTTCTAGCACGTCACAGATCCTCTCATTTGTGGTAAGTAAGAGCAGATGTCATTTTGATCATTTTAAGTTGCTTCCCCTCTCAAGAAACACGTCTCCTGTAACAGTAGGAGGATCAATGGAGAAACTTGTTTCAAGCTGGTGCAATAGTGTGAGAGCTGTACCTGAGGATTACATATATCCACCAGAAACAAGACCAAGAAACTTCCATGTTCCTATGGGTGAAAGCATCCCTGTGATCGACCTCAGCCAAGCAGAGGAAGGTGATCAATCATGGGATTCCAGAGAATCTAATGAACGAAACAATGAGTGTGTGGAAGGAGTTCTTCCAGATGCCGGCGGAAAAGGCTTGTACACAGAGTTTCGTCACGAAGGATTGCAGGCTCTGCACGAGCAGTACGAATTATGCAACAGAGAAGGTTCATGTCATCCTTTAGAGAGAGAGTGCGTTGGGGCATGTTCAGCGGAAGTTAAGAAGTTGGGTTCGAGGATCTTGAGGTTAATCAGTGAAGGACTTGGACTGCATGGAGAATATCTTGATGAATATAGCCAAACTATGGTACCAGTGACTAAAATCTATCCAACATGTCCTCAACCAGATTTGACTCTGGAAGTACCCAAGCATGTTGATCCTAGCATCATAACCCTTTTACTCCAAGATGGCATCTATGGACTTCAGGTGTTGAAGGATGATACCTGGGTTGGTGTTGATCCTAATCCACATGCAATTGTTGTCAATATAGCCTCCCAATTGCAGGTATTACTTGATTTTTCTATCTTTTGTTTAGTTATCTGAGTGACATTATTTGCTGTAAAGGTGGAACTGAAATCGAAACATGTAGCCAGCCAGCCATCGCCACTTTCTGATTCGGATCCAAATTCGTTGAACTCTGCCAACAATCTCCATCATGCTTCCTCCTCGACGTTGATAACTACCCATCCATTGAATCTACAACGCAGACACACTTTCCTGGCCAATTATGAACTGCCTCCTCAGTATAAATGCCGGAGTCAAGCAGGTATCAAGAAAGCACCCCAAAAAAGAATGGAACAGTCGCCAAGGAAAACGGCTAAGGAAGATGAACCAAAAGAGACTAAGTACAGAGGAGTACGGAGGCGGCCATGGGGGAAGTTCGCGGCGGAGATTCGAGATTCGAACAGGCACGGAGCTCGATTGTGGCTCGGCACTTTCAGCACGGCAGAAGAAGCGGCAAGAGCCTACGATCGTGCGGCGTTTGGGATGAGAGGGCATTCGGCCATTCTCAACTTCCCGGAAGAATATGATGTGAGCAACGTGGGGAGTGGTGGTTCTAGTGGGAGCCACCTGGATCGATCTTCATCGTCGTCTGCTTCGTCGTCGTCTTCAATGGCGGAAGCTCAGGGTGGGACACAGGAGGTGTTCGAGTTCCAGTGTCTGGATGATCAATTACTAGAGGACCTTCTCGATTACGCCGCCAAGAAGAAAGAGTGA | 1602 | 0.4675 | MEVKQVPTIIALRQPLLYLLFAISASYLFFFLISLSPEALFHCSSSSTSQILSFVVSKSRCHFDHFKLLPLSRNTSPVTVGGSMEKLVSSWCNSVRAVPEDYIYPPETRPRNFHVPMGESIPVIDLSQAEEGDQSWDSRESNERNNECVEGVLPDAGGKGLYTEFRHEGLQALHEQYELCNREGSCHPLERECVGACSAEVKKLGSRILRLISEGLGLHGEYLDEYSQTMVPVTKIYPTCPQPDLTLEVPKHVDPSIITLLLQDGIYGLQVLKDDTWVGVDPNPHAIVVNIASQLQVLLDFSIFCLVIXVTLFAVKVELKSKHVASQPSPLSDSDPNSLNSANNLHHASSSTLITTHPLNLQRRHTFLANYELPPQYKCRSQAGIKKAPQKRMEQSPRKTAKEDEPKETKYRGVRRRPWGKFAAEIRDSNRHGARLWLGTFSTAEEAARAYDRAAFGMRGHSAILNFPEEYDVSNVGSGGSSGSHLDRSSSSSASSSSSMAEAQGGTQEVFEFQCLDDQLLEDLLDYAAKKKE | 533 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele05g1389 | 533 | FunFam | Ethylene-responsive transcription factor 2 | 409 | 469 | - | - | |
| Lele05g1389 | 533 | Pfam | 2OG-Fe(II) oxygenase superfamily | 237 | 298 | IPR044861 | - | |
| Lele05g1389 | 533 | ProSiteProfiles | AP2/ERF domain profile. | 410 | 468 | IPR001471 | GO:0003700|GO:0006355 | |
| Lele05g1389 | 533 | MobiDBLite | consensus disorder prediction | 380 | 414 | - | - | |
| Lele05g1389 | 533 | SUPERFAMILY | DNA-binding domain | 410 | 469 | IPR016177 | GO:0003677 | |
| Lele05g1389 | 533 | MobiDBLite | consensus disorder prediction | 474 | 505 | - | - | |
| Lele05g1389 | 533 | Gene3D | AP2/ERF domain | 409 | 469 | IPR036955 | GO:0003700|GO:0006355 | |
| Lele05g1389 | 533 | ProSiteProfiles | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 228 | 375 | IPR005123 | - | |
| Lele05g1389 | 533 | SUPERFAMILY | Clavaminate synthase-like | 89 | 298 | - | - | |
| Lele05g1389 | 533 | Pfam | AP2 domain | 409 | 461 | IPR001471 | GO:0003700|GO:0006355 | |
| Lele05g1389 | 533 | MobiDBLite | consensus disorder prediction | 391 | 414 | - | - | |
| Lele05g1389 | 533 | MobiDBLite | consensus disorder prediction | 475 | 505 | - | - | |
| Lele05g1389 | 533 | Gene3D | - | 158 | 300 | IPR027443 | - | |
| Lele05g1389 | 533 | CDD | AP2 | 409 | 469 | IPR001471 | GO:0003700|GO:0006355 | |
| Lele05g1389 | 533 | PANTHER | DNA-BINDING DOMAIN | 360 | 523 | IPR044808 | GO:0003700|GO:0009873 | |
| Lele05g1389 | 533 | SMART | rav1_2 | 410 | 474 | IPR001471 | GO:0003700|GO:0006355 | |
| Lele05g1389 | 533 | MobiDBLite | consensus disorder prediction | 326 | 346 | - | - | |
| Lele05g1389 | 533 | PRINTS | Ethylene responsive element binding protein signature | 434 | 450 | IPR001471 | GO:0003700|GO:0006355 | |
| Lele05g1389 | 533 | PRINTS | Ethylene responsive element binding protein signature | 411 | 422 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele05g1389 | Lele-ChrLele05 | 8791339 | 8797515 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele05g1389 | 405 | 532 | AP2-EREBP Transcription Factor Family | AT3G23230 | 58.594 | 4.21e-37 | 132 |
Transcription factors information