Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1388 ATGAGTGCAACACTGTCTTCTCCGTCCTATCAGCAACCATGCCCAGATTGGAAGTTCTGGCAGGAGCCCTCTGATGCTTTCTTGGTCTCTCTGTCAAGCAACCAAGCTCAAGAAGACCCTTTCCACGATTATCTTTGCTTCGATATGATTGACAAGAAGGAAAATCAACCGCCGCTGACATGGGAAGCCATAGAAGCCGGCGAGACTGTCCAGGAAAGATCATACATAGGGGTGAGGAAGAGACCTTGGGGGAAATTTGCAGCAGAGATCAGAGACACCACCAGGAATGGCACCAGAGTTTGGCTAGGTACGTTCGAGAGTGCAGAGGAGGCTGCTTTAGCTTATGACCAAGCTGCATTCACCATGAGAGGCAACACCGCTGTTCTTAATTTTCCGGTGGAAAAGGTGAAGGAGTCTCTGCAACACATCGAGTATGGTTGCCTCAAAGGGTGTTCGCCGGCTTTAGCCCTAAAAGAGAGGCACTACATCCAAAGAAAACTGTCGTCAAAGGCCAAGAAAATCAAAGCCAAACAGCAATCAGAGGTGGTGGTGCTTGAGGACTTGGGTGTTGAATATCTGGAGCAACTTCTCAGCTTATGCGATCAAACTGCAAGCCCTAGCTAG 624 0.4904 MSATLSSPSYQQPCPDWKFWQEPSDAFLVSLSSNQAQEDPFHDYLCFDMIDKKENQPPLTWEAIEAGETVQERSYIGVRKRPWGKFAAEIRDTTRNGTRVWLGTFESAEEAALAYDQAAFTMRGNTAVLNFPVEKVKESLQHIEYGCLKGCSPALALKERHYIQRKLSSKAKKIKAKQQSEVVVLEDLGVEYLEQLLSLCDQTASPS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1388 207 ProSiteProfiles AP2/ERF domain profile. 74 132 IPR001471 GO:0003700|GO:0006355
Lele05g1388 207 FunFam Ethylene-responsive transcription factor 2 73 134 - -
Lele05g1388 207 Gene3D AP2/ERF domain 74 134 IPR036955 GO:0003700|GO:0006355
Lele05g1388 207 Pfam AP2 domain 75 124 IPR001471 GO:0003700|GO:0006355
Lele05g1388 207 SUPERFAMILY DNA-binding domain 75 134 IPR016177 GO:0003677
Lele05g1388 207 CDD AP2 75 133 IPR001471 GO:0003700|GO:0006355
Lele05g1388 207 PANTHER DNA-BINDING DOMAIN 57 198 IPR044808 GO:0003700|GO:0009873
Lele05g1388 207 SMART rav1_2 74 138 IPR001471 GO:0003700|GO:0006355
Lele05g1388 207 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700|GO:0006355
Lele05g1388 207 PRINTS Ethylene responsive element binding protein signature 98 114 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1388 Lele-ChrLele05 8779834 8780457 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1388 72 205 AP2-EREBP Transcription Factor Family AT3G23240 58.273 4.95e-55 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele05g1388 AP2 9.4e-15 CL0081