Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1387 ATGGATCTAGAGGCCTATATAAATAACTGCAATAATGGGATCAAAGTCCTATCATATCCGACTGCATCCCTGGCTATTATGTCCCGGCCGTCAACGCAGCAACCGTGCCCAGATTTGGAGTTTTGGGAGGAGACTTTGGATCCTTTCTGGGTCTCTTCATCAAGCAACCAAGTTCATGAAGACCCTTCCCACGATTATCTTTGCTTCGATATGGTTGACAATGCGGCAAATCACCCGCCGGTGAGTTCGGAAACCATAGCAACCGAGACTGTCAAGGAAAACACATACATAGGGGTGAGGAAGAGACCTTGGGGGAAATTTGCAGCAGAGATCAGAGACACTACCAGGAATGGCACCAGAGTTTGGCTGGGTACGTTCGAGAGTGCAGAGGAGGCTGCTTTAGCTTATGACCAAGCTGCATTCACCATGAGAGGCAACACCGCTGTTCTTAATTTTCCGGTGGAAAAGGTGAAGGAGTCTCTGCAACACATTGAGTATGGTTGCAGCAAAGGGTGTTCTCCGGCTTTAGCCCTAAAAGAGAGGCACTACATCCAAAGAAAACTGTCGTCAAAGGCTAAGAAAGACAAAGCCAAACAGCAATCAGAGGTGGTGGTGCTTGAGGATTTGGGTGTTGAATATCTGGAGCAACTTCTCAGCTTATCTGATCAAACTGCAAACCCTAGGTAG 687 0.476 MDLEAYINNCNNGIKVLSYPTASLAIMSRPSTQQPCPDLEFWEETLDPFWVSSSSNQVHEDPSHDYLCFDMVDNAANHPPVSSETIATETVKENTYIGVRKRPWGKFAAEIRDTTRNGTRVWLGTFESAEEAALAYDQAAFTMRGNTAVLNFPVEKVKESLQHIEYGCSKGCSPALALKERHYIQRKLSSKAKKDKAKQQSEVVVLEDLGVEYLEQLLSLSDQTANPR 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1387 228 FunFam Ethylene-responsive transcription factor 2 94 155 - -
Lele05g1387 228 ProSiteProfiles AP2/ERF domain profile. 95 153 IPR001471 GO:0003700|GO:0006355
Lele05g1387 228 PANTHER DNA-BINDING DOMAIN 75 221 IPR044808 GO:0003700|GO:0009873
Lele05g1387 228 CDD AP2 96 154 IPR001471 GO:0003700|GO:0006355
Lele05g1387 228 PRINTS Ethylene responsive element binding protein signature 119 135 IPR001471 GO:0003700|GO:0006355
Lele05g1387 228 PRINTS Ethylene responsive element binding protein signature 96 107 IPR001471 GO:0003700|GO:0006355
Lele05g1387 228 SUPERFAMILY DNA-binding domain 95 155 IPR016177 GO:0003677
Lele05g1387 228 Gene3D AP2/ERF domain 95 155 IPR036955 GO:0003700|GO:0006355
Lele05g1387 228 Pfam AP2 domain 96 145 IPR001471 GO:0003700|GO:0006355
Lele05g1387 228 SMART rav1_2 95 159 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1387 Lele-ChrLele05 8750406 8751092 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1387 58 225 AP2-EREBP Transcription Factor Family AT3G23240 48.045 1.25e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele05g1387 AP2 1.4e-14 CL0081