LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele05g1382	ATGATGGGGAAGGAAGAAATCCAAGTGTTGAATGCTCTAGATGTGGCGAAAACACAATGGTATCATTTTACTGCCATCATTATAGCAGGCATGGGGTTCTTCACGGACGCGTATGATCTGTTTGCGATTTCGCTTGTCACCAAGTTGATCGGTCGTGTTTATTACACCGGTGATGCAGAGAAACCTGGTACGTTGCCTCCCCACGTGTCGTCCGCCATTAATGGCGTAGCTTTCTGCGGAACACTCACCGGCCAACTCTTCTTCGGCTGGATGGGAGACAAGGTGGGACGAAGAGCCGTATACGGCATGACTTTGTTGACGATGATCATATGTGCCATTTGCTCCGGCCTCTCCTTTGGGCACACCGCTAAATCTGTCATGACCACTCTCTGCTTTTTCCGATTCTGGCTTGGCTTCGGTATCGGTGGTGACTACCCACTTTCTGCAACTATCATGTCTGAGTTTTCTAACAAGAAGACTCGTGGTGCTTTCATTTCTGCAGTTTTTGCAATGCAGGGTTTTGGGATTTTGGCTGGTGGCTTGTTTGCGATGATCATTTCAGCTATTTTCCGGTCCAGCTTCAAAGCTCCTCCTTATGAGGTCGATCCGGTTGGGTCAACTGTTCCACAAGCTGACTTTGTTTGGAGGATAATTTTGATGGCGGGATCGGTGCCAGCTGCTATGACTTACTATTGGAGGTTGAAGATGCCTGAAACTGCTCGCTACACTGCTCTTGTTGCCCAGAACGCAGAAAGAGCGGCGGCTGATATGGCCAAGGTTTTGCAGGTTGATGTTGAAGCTGATCTCAACAATTTCGAGAAGAAGAAGACGGTTACTCCTCAGATAAGGGCCAAGAGATTTGGATTGTTCTCTAAGGAGTTTCTGACTCGTCATGGTCTTCATTTGCTTGGAACTTCGAGTACTTGGTTCTTGCTTGACATTGCTTATTACAGCCAGAACCTGTTTCAGAAAGATATATTCAGTGCAGTTGGATGGATTCCTGCTGCAAAAACCATGAGTGCTCTCGACGAGCTTTACCACATTGCCAAGGCTCAAACGCTTATTGCTCTGTTCAGTGCAATTCCAGGCTACTGGTTCACTGTGGCTTTCATTGACAAAATAGGAAGATTCAAAATTCAGTTGATGGGGTTCTTCTTCATGACAGTGTTCATGTTTGCTTTGGCCATTCCTTACAATCACTGGACTCTCGAGGAGAACCGAATTGGATTCGTGGTATTGTACTCACTGACGTTCTTCTTTTCAAATTTTGGACCTAATGCGACAACATTTGTGGTGCCGGCAGAGATTTTCCCAGCCAGGTTCCGATCAACGTGTCATGGCATATCATCGGCGTCAGGGAAGCTTGGGGCTATAGTCGGGGCATTTGGGTTCTTGGCTCTGGCACAGAGCCAGGACCCGAGCAAAGTAGATGCAGGGTATCGTCCAGGTATTGGGGTGAAGAATTCACTGCTCGTGCTTGGCGCCATTAATGCTTTGGGCTTCGCTCTCACTTTCTTGGTGCCTGAGCCGAAGGGCAAATCCTTGGAGGAGATATCTGGGGATGCTGAGGATGAAGACGAAGGCAAGGTTGACACAGACCAAACACGAGGTTGCTGCAATAAAACAGCTCCAGCCGGTTAG	1641	0.4796	MMGKEEIQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFAISLVTKLIGRVYYTGDAEKPGTLPPHVSSAINGVAFCGTLTGQLFFGWMGDKVGRRAVYGMTLLTMIICAICSGLSFGHTAKSVMTTLCFFRFWLGFGIGGDYPLSATIMSEFSNKKTRGAFISAVFAMQGFGILAGGLFAMIISAIFRSSFKAPPYEVDPVGSTVPQADFVWRIILMAGSVPAAMTYYWRLKMPETARYTALVAQNAERAAADMAKVLQVDVEADLNNFEKKKTVTPQIRAKRFGLFSKEFLTRHGLHLLGTSSTWFLLDIAYYSQNLFQKDIFSAVGWIPAAKTMSALDELYHIAKAQTLIALFSAIPGYWFTVAFIDKIGRFKIQLMGFFFMTVFMFALAIPYNHWTLEENRIGFVVLYSLTFFFSNFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAIVGAFGFLALAQSQDPSKVDAGYRPGIGVKNSLLVLGAINALGFALTFLVPEPKGKSLEEISGDAEDEDEGKVDTDQTRGCCNKTAPAG	546

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele05g1382	546	Pfam	Sugar (and other) transporter	27	519	IPR005828	GO:0016020\|GO:0022857\|GO:0055085
	Lele05g1382	546	CDD	MFS_PhT	26	511	-	-
	Lele05g1382	546	Gene3D	MFS general substrate transporter like domains	21	536	IPR036259	-
	Lele05g1382	546	MobiDBLite	consensus disorder prediction	516	546	-	-
	Lele05g1382	546	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	21	510	-	-
	Lele05g1382	546	TIGRFAM	2A0109: phosphate:H+ symporter	12	520	IPR004738	GO:0005315\|GO:0006817\|GO:0016020
	Lele05g1382	546	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	25	512	IPR020846	GO:0022857
	Lele05g1382	546	FunFam	Inorganic phosphate transporter 1-6	21	533	-	-
	Lele05g1382	546	SUPERFAMILY	MFS general substrate transporter	12	519	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele05g1382	Lele-ChrLele05	8703328	8704968	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele05g1382	2	520	Inorganic Solute Cotransporters	AT2G38940	75.769	0.0	836