Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1373 ATGGCTTCGCTCTCAACATGGTTTCGGTACATGGCTCACAAGCTCGAGTACTCCATTTCAATCGGCATGAAGAGGTATAAAGGGGGCCAAATTACGGACAAAGAGGTCAATCATGTTATTTGGAAGAATCTCCTTCAAGGAAGGTTGACGTACTTGCACTGGAACAAAGGAGAGGCAATGGTCCCAGCCCTAGATGGAAACGGAGCAACTCTTCTTGTTCGGAAGTTACCAAAAGCAGACCCAACGCGTGTCTTTGTAGGAGACGTAATCGTTTTGAAGGACCCTGAGAAGCAAAACAATCATTTAATCAGAAGACTGGCTGCCATCGAAGGCTATGAAATGGCTTCTACAGATGAAAAGGATGAACCTTTTGTTCTTGAGGAGGACCAATGTTGGGTGTTGGCTGACAATCAGAATTTAAAACCCAAGGAAGCATATGATAGTAGAATATTTGGTCCAGTTCAAATGACAGACATTGTGGGCAGAGTCATATACTGCTTGCGATCTGCAGTAGACCATGGCCCTATACAGAACAGTCACTTTGGCATGCGGAGGGATTCGGCAGTGTTGGCAATGGAACTGGATATTGATGAGATGGCAAAGAGTAACAAAGCCTGA 618 0.4498 MASLSTWFRYMAHKLEYSISIGMKRYKGGQITDKEVNHVIWKNLLQGRLTYLHWNKGEAMVPALDGNGATLLVRKLPKADPTRVFVGDVIVLKDPEKQNNHLIRRLAAIEGYEMASTDEKDEPFVLEEDQCWVLADNQNLKPKEAYDSRIFGPVQMTDIVGRVIYCLRSAVDHGPIQNSHFGMRRDSAVLAMELDIDEMAKSNKA 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1373 205 Gene3D Umud Fragment, subunit A 45 182 - -
Lele05g1373 205 CDD S26_SPase_I 56 163 IPR019533 GO:0004252|GO:0006465
Lele05g1373 205 PANTHER OSJNBA0068L06.9 PROTEIN 1 204 - -
Lele05g1373 205 SUPERFAMILY LexA/Signal peptidase 56 177 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1373 Lele-ChrLele05 8650354 8658945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1373 60 176 MADS-box Gene Family AT1G29960 30.400 6.71e-08 47.8