Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1367 ATGGGTCTGAGAGACATTGGAGCTTCGCTACCACCTGGGTTTCGGTTTTATCCGAGTGATGAAGAATTGGTGTGCCATTATCTCTACAAAAAGATCTCAAACGAGGAAGCTCTCAAGGGTACTTTGGTCGAAATCGACTTGCATACGTGCGAGCCCTGGCAGCTTCCTGAGGTGGCTAAGCTGAACGCCAATGAGTGGTACTTCTTCAGCTTCCGTGACCGTAAATACGCGACGGGTTTCAGGACCAATAGGGCGACAACATCTGGATATTGGAAAGCGACTGGGAAGGATCGGACTGTTGTGGATCCGATCACAAGAGAGGTTGTGGGGATGAGGAAGACGCTGGTGTTCTACAGGAACAGAGCTCCCAATGGTATCAAAACGGGTTGGATCATGCATGAGTTCCGCTTGGAGATCCCACACATGCCCCCTAAGGAAGACTGGGTTTTGTGTAGAGTATTTCACAAGAACCAATCAGATAACAACAACAACAACAACAACAATATCATCAATGCAAAACTAATGTTGGACTCAACACTATCAGATCTGGCTTCTTCACCTTCTCCAACCAACAGTAATACCTTCCCTCTCCTCTCCTACAACCAACTTTGCTCTTCCCCCTTCAATCTAAACCACCACGATCCACATTCTCATAATAATTCTCTCGTCAACTTTCTTCCATTCCCTCGGGAAACAAACACCGCCGCCACAAGCACCGTAACTCACGACCAGATCAGCCCGAGAGGAGGTGGTGGTGGGGATGATGGTGGTTATGGCTTCTTTTGGGACATGGGCCTCGAAGATAACCGCTGCTTTCACAGTGGCGTAGACGCAATGAGATCCTTCGAGGTCGATAATAGTAATAATAGCATGGTCTTGTTATGA 885 0.478 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKISNEEALKGTLVEIDLHTCEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVVDPITREVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLEIPHMPPKEDWVLCRVFHKNQSDNNNNNNNNIINAKLMLDSTLSDLASSPSPTNSNTFPLLSYNQLCSSPFNLNHHDPHSHNNSLVNFLPFPRETNTAATSTVTHDQISPRGGGGGDDGGYGFFWDMGLEDNRCFHSGVDAMRSFEVDNSNNSMVLL 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1367 294 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Lele05g1367 294 SUPERFAMILY NAC domain 8 157 IPR036093 GO:0003677|GO:0006355
Lele05g1367 294 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Lele05g1367 294 Gene3D NAC domain 19 161 IPR036093 GO:0003677|GO:0006355
Lele05g1367 294 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1367 Lele-ChrLele05 8595368 8598859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1367 6 213 NAC Transcription Factor Family AT1G56010 48.611 9.40e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele05g1367 NAM 1.1e-37 No_clan