Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1362 ATGGATTCCGCAAGAGGTTGGTTTCAGAAGTTTCATCCAAGGGATAAAATGAGGTCTTCTTCGAAGAAGAAGGAGGGTTCTGGAGGAGGGATCGAAGATTCAGATGAACAGCTGGATGAAGAAGCTCTTTCTAATATAACAAAACAAAAGGTTGCGGCGGCAAAACAGTATATAGAGAACCATTATAAGGAGCAAATGAAGAGCCTTCAGGATAGAAAGGAGCGTCGAACTATCTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCTGAGGAAGACCAAAACAACCTTTTCAAGTTTCTGGAGAAAAAGGAAACTGAATACATGCGGCTTCAGAGGCATAAGATGGGTGTTGATGATTTTGAATTGTTGACTATGATTGGAAAAGGTGCATTTGGAGAGGTCAGAGTCTGCAGGGAAAAGACAACAGGGCATGTTTTTGCAATGAAAAAGCTAAAGAAATCAGAGATGCTTCGCAGAGGCCAGGTAGAACATGTCAGAGCTGAAAGGAACCTCCTTGCAGAGGTTGATAGCAATTGTATAGTCAAACTTTACTGTTCTTTCCAAGATGATGACTACCTATACCTGATTATGGAGTACCTACCTGGTGGGGACATGATGACTTTACTCATGAGAAAGGATATCTTGACTGAGGATGAAACTAGATTTTATGTAGGAGAAACAGTTTTGGCTATTGAATCTATACATAAACACAATTATATCCATAGGGACATCAAGCCTGATAATTTATTATTGGATAAATATGGACACTTAAGGCTGTCAGATTTTGGACTTTGTAAACCATTAGATTGCAGCATACTTCAAGAGGAGGACTTATCGGAAGGTCAGTATGTGAATGGTTCTACACAGAATGATGAACATGGTTCTTCAAAACGCACACAACAAGAACAATTACAACACTGGCAACAGAACAGGAGGACACTAGCTTATTCTACTGTTGGTACGCCAGATTATATTGCTCCAGAAGTTCTATTGAAGAAAGGTTATGCAATGGAATGTGATTGGTGGTCTCTTGGAGCTATTATGTATGAAATGTTGGTAGGATATCCTCCTTTTTATTCTGATGATCCAATGACAACATGCAGAAAGATAGTAAACTGGAAAACTCACTTGAAATTTCCTGAGGAAGCAATGCTATCTCCTGAAGCTAAAGATTTGATCAGTAAACTATTGTGTAATGTGAATCAGAGGCTGGGATCAAAAGGTGCAGGTGAAATAAAGGATCATCCATTTTTTGAAGGTATTGAATGGGATAATCTATACCAAAGGGAAGCTGCATTTATTCCTGAAGTTAATGACGACTTAGATACTCAAAATTTTGAGAAGTTTGATGAGTCCGACAATTGCAGTCAACCATCTTCTAGAAGTGGTCCGTGGAGGAAGATGCTCTCATCTAAAGACGTGAATTTTGTCGGATACACGTATAAGAACTTTGAAATTGTCAATGACTATCAAGTTCCCGGAATGGCTGAATTGAAAAAGAAAACCTCCAAAGTTAAGAGGCCATCCGTCAAGTCACTTTTTGATGGCGAGACAGCTGAAACATCAGAAGCCTCCGAGGCTTCTGCAAGCCATGAATCTGCTTAA 1605 0.3956 MDSARGWFQKFHPRDKMRSSSKKKEGSGGGIEDSDEQLDEEALSNITKQKVAAAKQYIENHYKEQMKSLQDRKERRTILEKKLADADVSEEDQNNLFKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTTGHVFAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDDYLYLIMEYLPGGDMMTLLMRKDILTEDETRFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSILQEEDLSEGQYVNGSTQNDEHGSSKRTQQEQLQHWQQNRRTLAYSTVGTPDYIAPEVLLKKGYAMECDWWSLGAIMYEMLVGYPPFYSDDPMTTCRKIVNWKTHLKFPEEAMLSPEAKDLISKLLCNVNQRLGSKGAGEIKDHPFFEGIEWDNLYQREAAFIPEVNDDLDTQNFEKFDESDNCSQPSSRSGPWRKMLSSKDVNFVGYTYKNFEIVNDYQVPGMAELKKKTSKVKRPSVKSLFDGETAETSEASEASASHESA 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1362 534 SMART serkin_6 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1362 534 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lele05g1362 534 FunFam Non-specific serine/threonine protein kinase 204 271 - -
Lele05g1362 534 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele05g1362 534 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Lele05g1362 534 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele05g1362 534 MobiDBLite consensus disorder prediction 1 43 - -
Lele05g1362 534 PANTHER SERINE/THREONINE-PROTEIN KINASE 33 468 - -
Lele05g1362 534 FunFam Non-specific serine/threonine protein kinase 317 436 - -
Lele05g1362 534 SUPERFAMILY Protein kinase-like (PK-like) 93 471 IPR011009 -
Lele05g1362 534 MobiDBLite consensus disorder prediction 515 534 - -
Lele05g1362 534 Gene3D Transferase(Phosphotransferase) domain 1 310 438 - -
Lele05g1362 534 Gene3D Transferase(Phosphotransferase) domain 1 204 269 - -
Lele05g1362 534 MobiDBLite consensus disorder prediction 501 534 - -
Lele05g1362 534 MobiDBLite consensus disorder prediction 283 304 - -
Lele05g1362 534 FunFam Non-specific serine/threonine protein kinase 91 203 - -
Lele05g1362 534 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1362 534 Gene3D Phosphorylase Kinase; domain 1 91 203 - -
Lele05g1362 534 ProSiteProfiles Protein kinase domain profile. 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1362 534 CDD STKc_NDR_like 118 482 - -
Lele05g1362 534 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Lele05g1362 534 MobiDBLite consensus disorder prediction 7 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1362 Lele-ChrLele05 8543382 8548912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1362 1 514 AGC Kinase Gene Family AT2G20470 79.008 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lele05g1362 Pkinase 1.8e-63 CL0016