Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1361 ATGAATGTGGGATTTGAGGTGATCCATGGCGATTTCAACATGATCAGACAACATATGCATGAATCTTGGGACTACCCGAATAATGTTGGGTTGTCTTCATCAGCTGCAATATCATCGTCATCACCAATCCCATTTCCAAAGCAGCCACCACCCATTGACAATACTACTGTAAACTTGGCAACAAATGAGTTTTCAGATTGGGTGGAGCATTTTACCAAACACCTTGTGGACGACTTACCAGCTGAGACCACCTCCACATCTGATCATAACTTTCTCCCCCCTTATAACCACCACCACCACCAAACAAGGTCTTCTTCTCATGACAACCTCGTACACACAGTAATTTCACCTGTTGTTGTATACCCTAGAAAAGGTCATGGTCCCTTATTCAACAACGACCTGCAAATTCAAATTCAAACTCAATCTCAAACAAACCCATTAGATCACAACAACCAAAACAACGATGGCGATGGGTTACACCTTTTAACCCATCTAATGGAATGTGCAGTTGCAATCTCAGTGGACAACCTCAATGAAGCACACAGGATGTTGCTCGAGCTAACCCAAGTTGTCTCCCCTTACAAGCCTTCCTGTGCAGAGCGTATTGTTGCATACTTCGCTAAAGCCATGGCTAGCAGAGTAATGAACTCGTGGCTTGGAGTATTTTCACCATTAGTTGATTGCAGAAGAATTCACTCTTCATTCCAAGTGTTCAACAACATTTCACCTTTCATAAAATTCGCTCATTTCACTTCAAACCAAGCAATTCTCGAAGCGGTGCATTACAGTGATAACATTCATATCATAGACTTAGACATTATGCAGGGTCTTCAATGGCCAGCCTTCTTCCACATCCTCGCCACACGAATGGAAGGTCGACCACGAGTTCGAATGACAGGCATGGGAGCTTCCATGGATCTCCTCGTAGAAACAGGCAAACAACTGACGAACTTCACTAAAAGACTCGGAATGTCGTTTCATTTCCAACCAATAGCGAGGAAGGTCGGGGAAATCGAGGATGTCGCCTCCATGGTGCAAGTAAGACCCGGCGAGACCCTCGCCGTTCACTGGTTACAACACTCACTTTACGACGCAACAGGACCAGATTGGAAAACTCTGAGACTTCTTGAAGAACTAGAGCCAAGAATCATAACGTTGGTGGAACAAGATGTTTCAAACGGCGGGTCGTTTTTGGATCGTTTTGTCGGGTCATTACACTATTATTCTACTGTGTTTGATTCTCTTGGAGCTTATATGACCAGTGAGGATCCGAACAGGCACAAGGTTGAACATGAGCTTCTGTCTAGAGAGATAAACAACATATTGGCGATCGGAGGTCCGGCGAGAAGTGGAGAAGACAAGTTCAGCCAATGGAGAAGTGAGCTTGCGGCGAGGCATTGCTTTGTGCAGGTTCCGATGAGCCCTAATTCTATGGCTCAAGCTCAATTGATACTGAACATGTTCTCGTCGTCTTCTTCTTCTTCTTATCGTGGCCATGGTTATACTCTGGCTCAAGTTGATGGCACCCTCAGGCTTGGATGGAAGAACACTGGCTTGTATACAGCTTCTGCATGGACATATCATTTCACCATGGATCATTTGGTTGGTGGGAAGTTTAAACTGGGAAGGAAAATTGGGAGTGGTTCTTTTGGGGAGCTTTATTTAGGCGTAAATGTGCAAAATGGAGAGGAGGTGGCCGTTAAGCTGTGGATATCCATCGTTCTATACTTAGATGCTGTAAACGTTGGCGCTATGGAACCTGTGAAGACCAGGCATCCTCAACTTTTCTACGAGTCAAAATTGTATATGCTTCTTCAAGGAGGAACGGGGATACCCCACATCAAATGGTTTGGAGTCGAGGGAGACTATAATGTCATGGTTATTGACCTTCTTGGACCAAGTCTGGAAGACTTGTTCAACTATTGCAACCGGAAATTCACATTGAAGACTGTGTTAATGCTTGCTGATCAATTAATTAACAGAGTTGAATATATGCATTCAAGAGGTCTTCTTCACCGTGATTTAAAGCCTGACAATTTCCTTATGGGCCTAGGACGTAAAGCAAATCAGGTGTACATAATTGACTATGGCCTTGCAAAGAAGTATAGGGATCTTCAGACTCATAACCACATACCATACAGAGAAAACAAGAACCTCACTGGCACAGCTCGCTATGCAAGCGTGAACACTCATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTTCTCATGTACTTCTTAAGAGGAAGTCTTCCTTGGCAGGGACTCAAGGCTGGCACAAAAAAACAAAAATATGATAAGATCAGTGAGAAGAAGGCATCAACCCCCATAGAGGTGCTCTGTAGATCATACCCATCTGAGTTTGCATCTTACTTCCACTACTGCCGGTCCTTGCGTTTCGAGGACAAGCCAGATTATTCATATTTAAAGAGACTTTTTCGAGACTTATTTATTCGAGAAGGGTATCAGTTTGACTATGTTTTTGATTGGACTATATTGAAGTATCCACAGATTGGTTCTAGCTCTAGAGGACGGCATGGCAGTGGCAAAGCAGCTATGAATGCAGGACCATCTATGCAAAAGCCAGAAAAGATGTCAGCAGGGAAAGATCTTCGAGAGAAATACCCGGGTACTGTTGAAACATTCTCCAGGAGAAACCCCACAAGTCCTGGTCCTCGGGGTGATCAAGCTAAGCAAAGGATATTTGAGGATGTACAGCAACATAAGGATATGCACCGTGAACAAGAGAAGGTACACAGTTCGGCTCGATATGGAAGCAGTTCAAGAAAGGCCCTCATCTCATCAAACAAGCCGAGTTCATCGGCTGACCACAGCGATATTCGTACTGGTCGGCTGACTACAACTACTAGCGGTAGCCGCCCTTCTACCACACGTGCTTTGTATGAGAGCAAACAACCAAGTTTTTCACGCAATACATCTTCTAGAGGCAATCGTGATGATCCTCTTAGGAGCTTTGAGCTTCTCTCCATCAGGAAGTAA 3018 0.4427 MNVGFEVIHGDFNMIRQHMHESWDYPNNVGLSSSAAISSSSPIPFPKQPPPIDNTTVNLATNEFSDWVEHFTKHLVDDLPAETTSTSDHNFLPPYNHHHHQTRSSSHDNLVHTVISPVVVYPRKGHGPLFNNDLQIQIQTQSQTNPLDHNNQNNDGDGLHLLTHLMECAVAISVDNLNEAHRMLLELTQVVSPYKPSCAERIVAYFAKAMASRVMNSWLGVFSPLVDCRRIHSSFQVFNNISPFIKFAHFTSNQAILEAVHYSDNIHIIDLDIMQGLQWPAFFHILATRMEGRPRVRMTGMGASMDLLVETGKQLTNFTKRLGMSFHFQPIARKVGEIEDVASMVQVRPGETLAVHWLQHSLYDATGPDWKTLRLLEELEPRIITLVEQDVSNGGSFLDRFVGSLHYYSTVFDSLGAYMTSEDPNRHKVEHELLSREINNILAIGGPARSGEDKFSQWRSELAARHCFVQVPMSPNSMAQAQLILNMFSSSSSSSYRGHGYTLAQVDGTLRLGWKNTGLYTASAWTYHFTMDHLVGGKFKLGRKIGSGSFGELYLGVNVQNGEEVAVKLWISIVLYLDAVNVGAMEPVKTRHPQLFYESKLYMLLQGGTGIPHIKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMHSRGLLHRDLKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHNHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKASTPIEVLCRSYPSEFASYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRGRHGSGKAAMNAGPSMQKPEKMSAGKDLREKYPGTVETFSRRNPTSPGPRGDQAKQRIFEDVQQHKDMHREQEKVHSSARYGSSSRKALISSNKPSSSADHSDIRTGRLTTTTSGSRPSTTRALYESKQPSFSRNTSSRGNRDDPLRSFELLSIRK 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1361 1005 Pfam Protein kinase domain 540 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1361 1005 ProSitePatterns Protein kinases ATP-binding region signature. 545 568 IPR017441 GO:0005524
Lele05g1361 1005 PANTHER CASEIN KINASE-RELATED 537 940 - -
Lele05g1361 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 670 682 IPR008271 GO:0004672|GO:0006468
Lele05g1361 1005 Pfam GRAS domain family 163 526 IPR005202 -
Lele05g1361 1005 ProSiteProfiles GRAS family profile. 152 526 IPR005202 -
Lele05g1361 1005 MobiDBLite consensus disorder prediction 927 988 - -
Lele05g1361 1005 MobiDBLite consensus disorder prediction 871 885 - -
Lele05g1361 1005 Gene3D Transferase(Phosphotransferase) domain 1 515 881 - -
Lele05g1361 1005 SMART serkin_6 539 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1361 1005 MobiDBLite consensus disorder prediction 846 1005 - -
Lele05g1361 1005 CDD STKc_CK1_delta_epsilon 538 828 - -
Lele05g1361 1005 ProSiteProfiles Protein kinase domain profile. 539 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1361 1005 FunFam Casein kinase 1-like protein 531 876 - -
Lele05g1361 1005 SUPERFAMILY Protein kinase-like (PK-like) 534 836 IPR011009 -
Lele05g1361 1005 MobiDBLite consensus disorder prediction 903 926 - -
Lele05g1361 1005 MobiDBLite consensus disorder prediction 989 1005 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1361 Lele-ChrLele05 8530467 8540493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1361 152 526 GRAS Transcription Factor Family AT3G54220 52.480 3.29e-125 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Lele05g1361 GRAS 1.7e-95 CL0063
TF GRAS Lele05g1361 GRAS 1.7e-95 CL0063