Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1344 ATGCAAAAGCTTGTCATGGAGACACCATATGCTGGGATAGGCATGAGAACCTTTCCAAAAGCTCCTCCTTTTCTCTTTTTTCTACTCTTACTATTCTTTCTTCCATTGCAGATCATTGCTTCTCCTAGAACTGAAGCAGAAGCTCTTATCAAATGGAAAACAAGTCTCTCTCTTCCTCTTGCTGATTTTCTCAATTCATGGTCCCTCACCAACCTCAACAATCTCTGCAGTTGGGAAGCCATTGTTTGTGATGATACTAACACAACAATCTCAGACATAGATCTGTCTAATGCAAACCTCACTGGGACACTTGAAGAGTTGGATTTTTCTTCTCTTCCAAATCTCTCCCTCTTCAACCTCAATACCAACAGTTTCAGTGGGTCAATTCCTTCTGCATTTGGTAACCTCTCCAAGATCAGTTTCTTGGACCTGGGATTAAACTTCTTTGAAGGAACACTTCCTGCTGAACTGGGTCAGCTAAAGGAGCTTCAATATCTTAGTGTTTACTTCAACTATCTCAACGGTACTATTCCTTATCAGCTCACAGAACTTCCAAAGGTATGGTACCTAGACCTTGGTTTCAACTTCTTTATATCTCCTGCTGATTGGTCATATTATTCAGGAATGCCATCCTTAACCCACCTTAGTTTGTCGCTCAATTCTTTAACTTCTGAATTCCCAAGTTTCATACTGGAATGTCAGAACCTGACATACCTTGACATCTCTCAGAATCACATGTCTGGCCTAATACCTAAATCCACGCATACTAATCTGGGTAAGCTTGAATATCTCAATCTCACCAATTGTGGGCTAGAAGGACCTCTATCATCAAACTTGTTCAAGCTCTCTACTCTAAAAGAACTTCGCTTGGGGAATAACAAGTTTTCTGGTCCTATCCCCAGAGAGTTAGGATTGATGTCTGGACTTCAAGTACTTGAATTGAATAACAATTCAATCATAGGGGAAATTCCTACCTCACTAGGAAATCTCAGGGATCTAGAGATGCTTGATCTCCATAATAATTTTTTGAATTCTACCATACCTTCTGAGCTTGGCTTCTGTACTAATCTAACCTTCCTGAGTTTGGCAATAAATAATTTTACTGGTCCTTTGCCTTTGTCATTATCTAAATTGACCAAAATAACAAAATTGGGGTTATCCGAAAATTCTTTTTCTGGCCAGCTTTCTTCTTTGTTGGTTTCCAATTGGACTGAGTTGGACTCTTTGCAACTTCAACACAATAAATTCACAGGAGAGATCCCGCCAGAGATTGGCTTGTTGACAAAAGTCACATACTTGTATCTGTATAATAACGAGTTCTTTGGTCCCATTCCTCATGAGATTGGAAACTTGAAAGTATTGATGGAATTAGACCTTTCAGCAAACCAATTCTCTGGACCAATTCCGTCAACTATTTGGACTCTTACAAACATTACCCTCATAAATCTCTTCTCCAATAAACTCTCTGGAACCATTGCCATGGATATTGGAAACTTGACCTCTCTACAAGTTTTCGATGTTGACACTAATTATTTGCACGGAGAGTTACCAGAGACTATTTCTCAGCTAACTGAGTTACAGTACTTTTCTGTATTCTCCAATAATTTTTCAGGCAACATTCCTAAGAATTTTGGGAAGTATAGTCCTTCTTTGAGTCGTGTCAGCTTCTCAAACAATAGCTTCTCTGGAGAACTACCAAGTGATTTGTGCAGTGGTTTCAATATAACACTTTTGACTCTGAATAACAACAGTTTTTCTGGGCAAGTTCCAAACTGCTTGAGAAATTGTTCGAAACTAGTTAGAGTTCGTCTTGATGGAAATCAATTCACTGGAAATATCACAGAAGTATTTGGAGTTCATCCCAGTCTTGCCGTTGTCTCATTGAGTGGCAATCAGTTTTCTGGCGAGCTCTCTCCTTTGTGGGGTGAATGCTTAAACTTAAGCAGGATAGAAATTGACAGAAATAAACTTTCGGGTAAAATTCCACCTGAACTAAGTAAGTTGAGCCGATTGCAATATTTAAGCCTGTACTCCAATGAATTGACTGGCCATATCCCACGTGAAATGGGCAATCTTAGCCAGCTTTACATGTTCAACTTGAGCAAGAACCATTTGACAGGGCAGATTCCAGAGAGTATTGCCAGATTAGCTCATCTTAATTATCTTGATTTATCAGATAACAACTTCACTGGAAGCATACCGAAAGAGCTTGGTAACCATGATGGCTTAAAGAGCTTGAATTTAAGTTACAACAATCTAGCTGGGGAGATACCGTCTGAGCTTGGCAACCTGTTCTCGCTTCAATACCTCTTGGATCTCAGTAGCAACTCTCTTTCAGGGCCAATTCCTCAAAACCTTGAGAAGCTCATTTCTTTGATGATACTCAATCTTTCACACAACCATCTTTCAGGGACAATCCCACAAACTTTTCCAAGTATGTTGAGCCTCCAATCTATTGATTTTTCTTATAATAATTTGACGGGTCCAATCCCAACTGGGGGCATTTTCAAAACAACGCCTGCTAAAGCTTATGCTGGAAACTCAGTATGTGGGGAAGGAAATGGATTAACTGCTTGCTCTACAGCATCTACCCCAGACAAGTCCAAAGGGCTAAACAAAAAGGTTCTTCTTGGGATTATCATACCAGTTTGTGGGCTATTAATCATAGGGATAATCGGATTCCTAATATTCCGTAGGCAGGCCAAACCCCTTGACGAGGAGACCAAAGATAGTGACAAGAATGAAAACTCCATATCCACCGTATGGGAAAGAGATGGAAAGTTCACATTTGCTGAAATTGTCAAGGCAACCGACGATTTCAATGAGAGGTACTGCATAGGAAAAGGAGGATTCGGAAGCGTTTATAGAGCGGCATTACCAACAGGTCTAGTTGTAGCAGTTAAAAGGCTCAATATCTCAGACTCCAGTGACATTCCAACAGTGAATCGCCAAAGTTTTGAGAATGAGATAAGAACACTTACCGAAGTGAGGCACCGCAACATCATCAAGTTTTATGGGTTCTGTTCCAGCAAGGGACGCTTGTACTTGGTGTATGAATATATGAACAGAGGCAGTCTAGGCAAAGTATTATACGGGGAGGAAGGCAAATTAGAACTAGAATGGTCTATAAGGATAAGAATTATACAGGGAATAGCACATTCAATTGCCTACCTTCACAGTGATTGTTCCCCGCCGGTAGTTCACCGAGATGTGACGGTCAACAACATATTATTGGACTCAGATTTTGAACCTCGCCTTGCAGATTTTGGCACTGCAAAGCTACTCAGCTACAATTCAACAACCTGGACCTCGATTGCTGGATCCTATGGCTACATGGCTCCAGGTATCTATCAATCTACGTACTCTTATTCTTCAATTGTTTCAATTTCAATGCATATCCAATTACCATCTCGGCATGCAAAATTATGGTTCGTGACAAATTTAAAACCTGCAGAGCTAGCACAAACCATGAGAGTCACGGAGAAATGCGATGTGTACAGCTTTGGAGTGGTGGCGTTAGAGATAGTGATGGGGAAGCACCCAGGGGAGTTCCTAACTTCGATGTCTTCAATGAAGTTTATGTCGTCAATGGAGGATTCAGAGATGCTTCTGGAGGATGTACTGGATCAGAGGCTACCAACTCCAAGAGGCAAATTAAGTGAAGCAATAGGGTTCATAGTGACAATAGGGTTGGCCTGCACGCGTAACAATCCAGAGTCGAGACCCGTGATGCGTTCTGTGGCACAAGAACTTTCAGTTAAGACGCAAAGTTGTCTTGGAGAGCCGTTTGGGACGAGAACCAAAAGCAAGTTAACGGGGTATCAGAAGTAG 3831 0.4101 MQKLVMETPYAGIGMRTFPKAPPFLFFLLLLFFLPLQIIASPRTEAEALIKWKTSLSLPLADFLNSWSLTNLNNLCSWEAIVCDDTNTTISDIDLSNANLTGTLEELDFSSLPNLSLFNLNTNSFSGSIPSAFGNLSKISFLDLGLNFFEGTLPAELGQLKELQYLSVYFNYLNGTIPYQLTELPKVWYLDLGFNFFISPADWSYYSGMPSLTHLSLSLNSLTSEFPSFILECQNLTYLDISQNHMSGLIPKSTHTNLGKLEYLNLTNCGLEGPLSSNLFKLSTLKELRLGNNKFSGPIPRELGLMSGLQVLELNNNSIIGEIPTSLGNLRDLEMLDLHNNFLNSTIPSELGFCTNLTFLSLAINNFTGPLPLSLSKLTKITKLGLSENSFSGQLSSLLVSNWTELDSLQLQHNKFTGEIPPEIGLLTKVTYLYLYNNEFFGPIPHEIGNLKVLMELDLSANQFSGPIPSTIWTLTNITLINLFSNKLSGTIAMDIGNLTSLQVFDVDTNYLHGELPETISQLTELQYFSVFSNNFSGNIPKNFGKYSPSLSRVSFSNNSFSGELPSDLCSGFNITLLTLNNNSFSGQVPNCLRNCSKLVRVRLDGNQFTGNITEVFGVHPSLAVVSLSGNQFSGELSPLWGECLNLSRIEIDRNKLSGKIPPELSKLSRLQYLSLYSNELTGHIPREMGNLSQLYMFNLSKNHLTGQIPESIARLAHLNYLDLSDNNFTGSIPKELGNHDGLKSLNLSYNNLAGEIPSELGNLFSLQYLLDLSSNSLSGPIPQNLEKLISLMILNLSHNHLSGTIPQTFPSMLSLQSIDFSYNNLTGPIPTGGIFKTTPAKAYAGNSVCGEGNGLTACSTASTPDKSKGLNKKVLLGIIIPVCGLLIIGIIGFLIFRRQAKPLDEETKDSDKNENSISTVWERDGKFTFAEIVKATDDFNERYCIGKGGFGSVYRAALPTGLVVAVKRLNISDSSDIPTVNRQSFENEIRTLTEVRHRNIIKFYGFCSSKGRLYLVYEYMNRGSLGKVLYGEEGKLELEWSIRIRIIQGIAHSIAYLHSDCSPPVVHRDVTVNNILLDSDFEPRLADFGTAKLLSYNSTTWTSIAGSYGYMAPGIYQSTYSYSSIVSISMHIQLPSRHAKLWFVTNLKPAELAQTMRVTEKCDVYSFGVVALEIVMGKHPGEFLTSMSSMKFMSSMEDSEMLLEDVLDQRLPTPRGKLSEAIGFIVTIGLACTRNNPESRPVMRSVAQELSVKTQSCLGEPFGTRTKSKLTGYQK 1276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1344 1276 Gene3D Ribonuclease Inhibitor 495 862 IPR032675 -
Lele05g1344 1276 Pfam Protein kinase domain 945 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1344 1276 Pfam Protein tyrosine and serine/threonine kinase 1150 1251 IPR001245 GO:0004672|GO:0006468
Lele05g1344 1276 PANTHER LEUCINE RICH REPEAT KINASE 2 496 1255 - -
Lele05g1344 1276 Gene3D Ribonuclease Inhibitor 301 398 IPR032675 -
Lele05g1344 1276 SUPERFAMILY L domain-like 354 542 - -
Lele05g1344 1276 FunFam MDIS1-interacting receptor like kinase 2 207 400 - -
Lele05g1344 1276 Pfam Leucine rich repeat N-terminal domain 44 84 IPR013210 -
Lele05g1344 1276 SMART LRR_typ_2 668 692 IPR003591 -
Lele05g1344 1276 SMART LRR_typ_2 306 329 IPR003591 -
Lele05g1344 1276 SMART LRR_typ_2 209 233 IPR003591 -
Lele05g1344 1276 SMART LRR_typ_2 112 135 IPR003591 -
Lele05g1344 1276 SMART LRR_typ_2 499 523 IPR003591 -
Lele05g1344 1276 SMART LRR_typ_2 258 282 IPR003591 -
Lele05g1344 1276 SMART LRR_typ_2 789 812 IPR003591 -
Lele05g1344 1276 SMART LRR_typ_2 716 740 IPR003591 -
Lele05g1344 1276 SMART LRR_typ_2 451 475 IPR003591 -
Lele05g1344 1276 SMART LRR_typ_2 330 354 IPR003591 -
Lele05g1344 1276 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1066 1078 IPR008266 GO:0004672|GO:0006468
Lele05g1344 1276 ProSitePatterns Protein kinases ATP-binding region signature. 946 968 IPR017441 GO:0005524
Lele05g1344 1276 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 548 863 - -
Lele05g1344 1276 Pfam Leucine rich repeat 694 753 IPR001611 GO:0005515
Lele05g1344 1276 Pfam Leucine rich repeat 210 271 IPR001611 GO:0005515
Lele05g1344 1276 FunFam Leucine-rich repeat receptor protein kinase MSP1 904 1020 - -
Lele05g1344 1276 SUPERFAMILY RNI-like 92 399 - -
Lele05g1344 1276 FunFam Nuclear pore complex protein NUP107 42 201 - -
Lele05g1344 1276 SUPERFAMILY RNI-like 540 830 - -
Lele05g1344 1276 Gene3D Ribonuclease Inhibitor 203 300 IPR032675 -
Lele05g1344 1276 Gene3D Ribonuclease Inhibitor 399 494 IPR032675 -
Lele05g1344 1276 Gene3D Ribonuclease Inhibitor 42 202 IPR032675 -
Lele05g1344 1276 Gene3D Transferase(Phosphotransferase) domain 1 1021 1260 - -
Lele05g1344 1276 ProSiteProfiles Protein kinase domain profile. 940 1253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1344 1276 SUPERFAMILY Protein kinase-like (PK-like) 916 1251 IPR011009 -
Lele05g1344 1276 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 447 544 - -
Lele05g1344 1276 Gene3D Phosphorylase Kinase; domain 1 902 1020 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1344 Lele-ChrLele05 8440112 8443942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1344 39 686 Receptor kinase-like Gene Family AT4G08850 32.923 2.32e-89 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele05g1344 Pkinase 3.3e-35 CL0016